STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_37574Malonyl-CoA decarboxylase. (532 aa)    
Predicted Functional Partners:
COLO4_16461
Carboxyl transferase.
     
 0.935
COLO4_09055
Biotin/lipoyl attachment.
     
 0.907
COLO4_08133
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.901
COLO4_07907
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.901
COLO4_34657
AMP-dependent synthetase/ligase.
    
 0.900
COLO4_02350
Acetyl-CoA carboxylase carboxyl transferase, beta subunit.
    
 0.899
COLO4_30703
2-oxoacid_dh domain-containing protein.
    
 0.895
COLO4_30700
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.895
COLO4_24385
Pyruvate carboxyltransferase.
    
  0.895
COLO4_31943
C2 calcium-dependent membrane targeting.
   
 
 0.894
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.