Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_13755 | COLO4_21007 | A0A1R3JV14 | A0A1R3IVN9 | Zinc finger, RING-type. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.973 |
COLO4_13755 | COLO4_37160 | A0A1R3JV14 | A0A1R3G327 | Zinc finger, RING-type. | Uncharacterized protein. | 0.663 |
COLO4_13755 | COLO4_37161 | A0A1R3JV14 | A0A1R3G324 | Zinc finger, RING-type. | Uncharacterized protein. | 0.663 |
COLO4_13756 | COLO4_21007 | A0A1R3JV16 | A0A1R3IVN9 | Uncharacterized protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.973 |
COLO4_13756 | COLO4_37160 | A0A1R3JV16 | A0A1R3G327 | Uncharacterized protein. | Uncharacterized protein. | 0.595 |
COLO4_13756 | COLO4_37161 | A0A1R3JV16 | A0A1R3G324 | Uncharacterized protein. | Uncharacterized protein. | 0.595 |
COLO4_13962 | COLO4_21007 | A0A1R3JTZ5 | A0A1R3IVN9 | E3 ubiquitin-protein ligase. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.973 |
COLO4_13962 | COLO4_37160 | A0A1R3JTZ5 | A0A1R3G327 | E3 ubiquitin-protein ligase. | Uncharacterized protein. | 0.678 |
COLO4_13962 | COLO4_37161 | A0A1R3JTZ5 | A0A1R3G324 | E3 ubiquitin-protein ligase. | Uncharacterized protein. | 0.665 |
COLO4_15143 | COLO4_37160 | A0A1R3JPC6 | A0A1R3G327 | CCHC-type domain-containing protein. | Uncharacterized protein. | 0.663 |
COLO4_15143 | COLO4_37161 | A0A1R3JPC6 | A0A1R3G324 | CCHC-type domain-containing protein. | Uncharacterized protein. | 0.597 |
COLO4_18111 | COLO4_21007 | A0A1R3JAA6 | A0A1R3IVN9 | Tetratricopeptide TPR-1. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.498 |
COLO4_18111 | COLO4_21511 | A0A1R3JAA6 | A0A1R3IT25 | Tetratricopeptide TPR-1. | RNA polymerase II accessory factor, Cdc73. | 0.999 |
COLO4_18111 | COLO4_30512 | A0A1R3JAA6 | A0A1R3H878 | Tetratricopeptide TPR-1. | RNA polymerase II-associated, Paf1. | 0.999 |
COLO4_18111 | COLO4_31510 | A0A1R3JAA6 | A0A1R3H4I6 | Tetratricopeptide TPR-1. | Plus-3. | 0.989 |
COLO4_18111 | COLO4_37160 | A0A1R3JAA6 | A0A1R3G327 | Tetratricopeptide TPR-1. | Uncharacterized protein. | 0.899 |
COLO4_18111 | COLO4_37161 | A0A1R3JAA6 | A0A1R3G324 | Tetratricopeptide TPR-1. | Uncharacterized protein. | 0.899 |
COLO4_21007 | COLO4_13755 | A0A1R3IVN9 | A0A1R3JV14 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Zinc finger, RING-type. | 0.973 |
COLO4_21007 | COLO4_13756 | A0A1R3IVN9 | A0A1R3JV16 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.973 |
COLO4_21007 | COLO4_13962 | A0A1R3IVN9 | A0A1R3JTZ5 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | E3 ubiquitin-protein ligase. | 0.973 |
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