STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_36832Zinc finger protein 2-like protein. (167 aa)    
Predicted Functional Partners:
COLO4_14303
Uncharacterized protein.
  
     0.457
COLO4_18331
Senescence regulator.
  
     0.456
COLO4_30266
Late embryogenesis abundant protein, LEA-14.
  
     0.454
COLO4_36741
Late embryogenesis abundant protein, LEA-14.
  
     0.450
COLO4_26392
Uncharacterized protein.
  
     0.449
COLO4_05742
WAT1-related protein.
  
     0.449
COLO4_32674
Cyclin-dependent kinase inhibitor; Belongs to the CDI family. ICK/KRP subfamily.
  
     0.440
COLO4_30562
BHLH domain-containing protein.
  
     0.439
COLO4_32872
Uncharacterized protein.
      
 0.434
COLO4_05601
LOB domain-containing protein.
  
     0.426
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.