STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_35658Uncharacterized protein. (660 aa)    
Predicted Functional Partners:
COLO4_04565
E3 ubiquitin-protein ligase PRT1-like protein.
  
 
  0.570
COLO4_34797
Uncharacterized protein.
    
 0.569
COLO4_29093
DUF1421 domain-containing protein.
  
 
  0.482
COLO4_36034
PapD-like protein.
  
 
   0.474
COLO4_18477
Uncharacterized protein.
  
 
  0.469
COLO4_22781
Uncharacterized protein.
  
 
  0.465
COLO4_24325
Uncharacterized protein.
  
     0.462
COLO4_22294
Glycos_transf_N domain-containing protein.
    
  0.458
COLO4_23306
Uncharacterized protein.
  
 
   0.457
COLO4_28986
Uncharacterized protein.
   
 0.451
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.