Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_09101 | COLO4_34214 | A0A1R3KD98 | A0A1R3GMU5 | Mitochondrial Rho GTPase. | Putative exocyst complex component 4-like isoform 1 protein. | 0.485 |
COLO4_09101 | COLO4_34215 | A0A1R3KD98 | A0A1R3GN04 | Mitochondrial Rho GTPase. | Sec8_exocyst domain-containing protein. | 0.485 |
COLO4_09101 | COLO4_35511 | A0A1R3KD98 | A0A1R3GG31 | Mitochondrial Rho GTPase. | IQ motif, EF-hand binding site; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.554 |
COLO4_13479 | COLO4_34214 | A0A1R3JWK6 | A0A1R3GMU5 | Mitochondrial Rho GTPase. | Putative exocyst complex component 4-like isoform 1 protein. | 0.485 |
COLO4_13479 | COLO4_34215 | A0A1R3JWK6 | A0A1R3GN04 | Mitochondrial Rho GTPase. | Sec8_exocyst domain-containing protein. | 0.485 |
COLO4_13479 | COLO4_35511 | A0A1R3JWK6 | A0A1R3GG31 | Mitochondrial Rho GTPase. | IQ motif, EF-hand binding site; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.554 |
COLO4_15020 | COLO4_34214 | A0A1R3JQ01 | A0A1R3GMU5 | Mitochondrial Rho GTPase. | Putative exocyst complex component 4-like isoform 1 protein. | 0.485 |
COLO4_15020 | COLO4_34215 | A0A1R3JQ01 | A0A1R3GN04 | Mitochondrial Rho GTPase. | Sec8_exocyst domain-containing protein. | 0.485 |
COLO4_15020 | COLO4_35511 | A0A1R3JQ01 | A0A1R3GG31 | Mitochondrial Rho GTPase. | IQ motif, EF-hand binding site; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.554 |
COLO4_23534 | COLO4_35511 | A0A1R3IFZ6 | A0A1R3GG31 | Actin-related protein; Belongs to the actin family. | IQ motif, EF-hand binding site; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.538 |
COLO4_25816 | COLO4_35511 | A0A1R3I032 | A0A1R3GG31 | Sel1-like protein. | IQ motif, EF-hand binding site; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.538 |
COLO4_31906 | COLO4_34214 | A0A1R3H3A3 | A0A1R3GMU5 | Small GTPase superfamily. | Putative exocyst complex component 4-like isoform 1 protein. | 0.610 |
COLO4_31906 | COLO4_34215 | A0A1R3H3A3 | A0A1R3GN04 | Small GTPase superfamily. | Sec8_exocyst domain-containing protein. | 0.610 |
COLO4_31906 | COLO4_35511 | A0A1R3H3A3 | A0A1R3GG31 | Small GTPase superfamily. | IQ motif, EF-hand binding site; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.518 |
COLO4_31906 | COLO4_38438 | A0A1R3H3A3 | A0A1R3FV37 | Small GTPase superfamily. | Actin-related protein; Belongs to the actin family. | 0.427 |
COLO4_34214 | COLO4_09101 | A0A1R3GMU5 | A0A1R3KD98 | Putative exocyst complex component 4-like isoform 1 protein. | Mitochondrial Rho GTPase. | 0.485 |
COLO4_34214 | COLO4_13479 | A0A1R3GMU5 | A0A1R3JWK6 | Putative exocyst complex component 4-like isoform 1 protein. | Mitochondrial Rho GTPase. | 0.485 |
COLO4_34214 | COLO4_15020 | A0A1R3GMU5 | A0A1R3JQ01 | Putative exocyst complex component 4-like isoform 1 protein. | Mitochondrial Rho GTPase. | 0.485 |
COLO4_34214 | COLO4_31906 | A0A1R3GMU5 | A0A1R3H3A3 | Putative exocyst complex component 4-like isoform 1 protein. | Small GTPase superfamily. | 0.610 |
COLO4_34214 | COLO4_34215 | A0A1R3GMU5 | A0A1R3GN04 | Putative exocyst complex component 4-like isoform 1 protein. | Sec8_exocyst domain-containing protein. | 0.951 |
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