Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_05311 | COLO4_11679 | A0A1R3KRB8 | A0A1R3K3L3 | Heat shock protein 70 family; Belongs to the heat shock protein 70 family. | Chaperone DnaK; Belongs to the heat shock protein 70 family. | 0.567 |
COLO4_05311 | COLO4_15470 | A0A1R3KRB8 | A0A1R3JMZ3 | Heat shock protein 70 family; Belongs to the heat shock protein 70 family. | Uncharacterized protein. | 0.603 |
COLO4_05311 | COLO4_17299 | A0A1R3KRB8 | A0A1R3JDC8 | Heat shock protein 70 family; Belongs to the heat shock protein 70 family. | J domain-containing protein. | 0.754 |
COLO4_05311 | COLO4_35491 | A0A1R3KRB8 | A0A1R3GGL7 | Heat shock protein 70 family; Belongs to the heat shock protein 70 family. | J domain-containing protein. | 0.417 |
COLO4_06983 | COLO4_09438 | A0A1R3KLC9 | A0A1R3KCB9 | NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. | NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. | 0.887 |
COLO4_06983 | COLO4_13924 | A0A1R3KLC9 | A0A1R3JU53 | NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. | NAD(P)-bd_dom domain-containing protein. | 0.935 |
COLO4_06983 | COLO4_35491 | A0A1R3KLC9 | A0A1R3GGL7 | NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. | J domain-containing protein. | 0.557 |
COLO4_09438 | COLO4_06983 | A0A1R3KCB9 | A0A1R3KLC9 | NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. | NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. | 0.887 |
COLO4_09438 | COLO4_13924 | A0A1R3KCB9 | A0A1R3JU53 | NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. | NAD(P)-bd_dom domain-containing protein. | 0.935 |
COLO4_09438 | COLO4_35491 | A0A1R3KCB9 | A0A1R3GGL7 | NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. | J domain-containing protein. | 0.557 |
COLO4_11679 | COLO4_05311 | A0A1R3K3L3 | A0A1R3KRB8 | Chaperone DnaK; Belongs to the heat shock protein 70 family. | Heat shock protein 70 family; Belongs to the heat shock protein 70 family. | 0.567 |
COLO4_11679 | COLO4_15470 | A0A1R3K3L3 | A0A1R3JMZ3 | Chaperone DnaK; Belongs to the heat shock protein 70 family. | Uncharacterized protein. | 0.558 |
COLO4_11679 | COLO4_17299 | A0A1R3K3L3 | A0A1R3JDC8 | Chaperone DnaK; Belongs to the heat shock protein 70 family. | J domain-containing protein. | 0.763 |
COLO4_11679 | COLO4_35491 | A0A1R3K3L3 | A0A1R3GGL7 | Chaperone DnaK; Belongs to the heat shock protein 70 family. | J domain-containing protein. | 0.411 |
COLO4_13924 | COLO4_06983 | A0A1R3JU53 | A0A1R3KLC9 | NAD(P)-bd_dom domain-containing protein. | NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. | 0.935 |
COLO4_13924 | COLO4_09438 | A0A1R3JU53 | A0A1R3KCB9 | NAD(P)-bd_dom domain-containing protein. | NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. | 0.935 |
COLO4_13924 | COLO4_35491 | A0A1R3JU53 | A0A1R3GGL7 | NAD(P)-bd_dom domain-containing protein. | J domain-containing protein. | 0.862 |
COLO4_15470 | COLO4_05311 | A0A1R3JMZ3 | A0A1R3KRB8 | Uncharacterized protein. | Heat shock protein 70 family; Belongs to the heat shock protein 70 family. | 0.603 |
COLO4_15470 | COLO4_11679 | A0A1R3JMZ3 | A0A1R3K3L3 | Uncharacterized protein. | Chaperone DnaK; Belongs to the heat shock protein 70 family. | 0.558 |
COLO4_15470 | COLO4_35491 | A0A1R3JMZ3 | A0A1R3GGL7 | Uncharacterized protein. | J domain-containing protein. | 0.782 |
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