Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_09327 | COLO4_12864 | A0A1R3KCE4 | A0A1R3JZC1 | Alpha/beta hydrolase-1. | Monoglyceride lipase-like protein. | 0.592 |
COLO4_09327 | COLO4_20414 | A0A1R3KCE4 | A0A1R3IZX8 | Alpha/beta hydrolase-1. | AMP-dependent synthetase/ligase. | 0.926 |
COLO4_09327 | COLO4_23345 | A0A1R3KCE4 | A0A1R3IHF5 | Alpha/beta hydrolase-1. | Alpha/beta hydrolase-1. | 0.890 |
COLO4_09327 | COLO4_26682 | A0A1R3KCE4 | A0A1R3HV24 | Alpha/beta hydrolase-1. | NAD-dependent epimerase/dehydratase. | 0.510 |
COLO4_09327 | COLO4_35397 | A0A1R3KCE4 | A0A1R3GH45 | Alpha/beta hydrolase-1. | O-methyltransferase, family 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. | 0.449 |
COLO4_12864 | COLO4_09327 | A0A1R3JZC1 | A0A1R3KCE4 | Monoglyceride lipase-like protein. | Alpha/beta hydrolase-1. | 0.592 |
COLO4_12864 | COLO4_20414 | A0A1R3JZC1 | A0A1R3IZX8 | Monoglyceride lipase-like protein. | AMP-dependent synthetase/ligase. | 0.923 |
COLO4_12864 | COLO4_23345 | A0A1R3JZC1 | A0A1R3IHF5 | Monoglyceride lipase-like protein. | Alpha/beta hydrolase-1. | 0.586 |
COLO4_12864 | COLO4_26682 | A0A1R3JZC1 | A0A1R3HV24 | Monoglyceride lipase-like protein. | NAD-dependent epimerase/dehydratase. | 0.528 |
COLO4_12864 | COLO4_35397 | A0A1R3JZC1 | A0A1R3GH45 | Monoglyceride lipase-like protein. | O-methyltransferase, family 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. | 0.615 |
COLO4_20414 | COLO4_09327 | A0A1R3IZX8 | A0A1R3KCE4 | AMP-dependent synthetase/ligase. | Alpha/beta hydrolase-1. | 0.926 |
COLO4_20414 | COLO4_12864 | A0A1R3IZX8 | A0A1R3JZC1 | AMP-dependent synthetase/ligase. | Monoglyceride lipase-like protein. | 0.923 |
COLO4_20414 | COLO4_23345 | A0A1R3IZX8 | A0A1R3IHF5 | AMP-dependent synthetase/ligase. | Alpha/beta hydrolase-1. | 0.941 |
COLO4_20414 | COLO4_26682 | A0A1R3IZX8 | A0A1R3HV24 | AMP-dependent synthetase/ligase. | NAD-dependent epimerase/dehydratase. | 0.940 |
COLO4_20414 | COLO4_34899 | A0A1R3IZX8 | A0A1R3GJ09 | AMP-dependent synthetase/ligase. | Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. | 0.951 |
COLO4_20414 | COLO4_35397 | A0A1R3IZX8 | A0A1R3GH45 | AMP-dependent synthetase/ligase. | O-methyltransferase, family 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. | 0.425 |
COLO4_23345 | COLO4_09327 | A0A1R3IHF5 | A0A1R3KCE4 | Alpha/beta hydrolase-1. | Alpha/beta hydrolase-1. | 0.890 |
COLO4_23345 | COLO4_12864 | A0A1R3IHF5 | A0A1R3JZC1 | Alpha/beta hydrolase-1. | Monoglyceride lipase-like protein. | 0.586 |
COLO4_23345 | COLO4_20414 | A0A1R3IHF5 | A0A1R3IZX8 | Alpha/beta hydrolase-1. | AMP-dependent synthetase/ligase. | 0.941 |
COLO4_23345 | COLO4_26682 | A0A1R3IHF5 | A0A1R3HV24 | Alpha/beta hydrolase-1. | NAD-dependent epimerase/dehydratase. | 0.507 |
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