Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_04757 | COLO4_31893 | A0A1R3KT17 | A0A1R3H2W1 | Uncharacterized protein. | E3 ubiquitin-protein ligase. | 0.917 |
COLO4_04757 | COLO4_34929 | A0A1R3KT17 | A0A1R3GIU0 | Uncharacterized protein. | Uncharacterized protein. | 0.589 |
COLO4_07632 | COLO4_31893 | A0A1R3KJ65 | A0A1R3H2W1 | Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. | E3 ubiquitin-protein ligase. | 0.917 |
COLO4_07632 | COLO4_34929 | A0A1R3KJ65 | A0A1R3GIU0 | Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.589 |
COLO4_09747 | COLO4_13717 | A0A1R3KB65 | A0A1R3JVA9 | t-SNARE coiled-coil homology domain-containing protein. | Vesicle transport protein, Use1. | 0.584 |
COLO4_09747 | COLO4_18772 | A0A1R3KB65 | A0A1R3J7U2 | t-SNARE coiled-coil homology domain-containing protein. | Synaptobrevin; Belongs to the synaptobrevin family. | 0.992 |
COLO4_09747 | COLO4_27977 | A0A1R3KB65 | A0A1R3HNP3 | t-SNARE coiled-coil homology domain-containing protein. | t-SNARE coiled-coil homology domain-containing protein. | 0.991 |
COLO4_09747 | COLO4_31399 | A0A1R3KB65 | A0A1R3H4Q4 | t-SNARE coiled-coil homology domain-containing protein. | t-SNARE coiled-coil homology domain-containing protein. | 0.555 |
COLO4_09747 | COLO4_34929 | A0A1R3KB65 | A0A1R3GIU0 | t-SNARE coiled-coil homology domain-containing protein. | Uncharacterized protein. | 0.797 |
COLO4_09747 | COLO4_36942 | A0A1R3KB65 | A0A1R3G485 | t-SNARE coiled-coil homology domain-containing protein. | V-SNARE domain-containing protein. | 0.990 |
COLO4_13717 | COLO4_09747 | A0A1R3JVA9 | A0A1R3KB65 | Vesicle transport protein, Use1. | t-SNARE coiled-coil homology domain-containing protein. | 0.584 |
COLO4_13717 | COLO4_18772 | A0A1R3JVA9 | A0A1R3J7U2 | Vesicle transport protein, Use1. | Synaptobrevin; Belongs to the synaptobrevin family. | 0.939 |
COLO4_13717 | COLO4_27977 | A0A1R3JVA9 | A0A1R3HNP3 | Vesicle transport protein, Use1. | t-SNARE coiled-coil homology domain-containing protein. | 0.542 |
COLO4_13717 | COLO4_31399 | A0A1R3JVA9 | A0A1R3H4Q4 | Vesicle transport protein, Use1. | t-SNARE coiled-coil homology domain-containing protein. | 0.584 |
COLO4_13717 | COLO4_34929 | A0A1R3JVA9 | A0A1R3GIU0 | Vesicle transport protein, Use1. | Uncharacterized protein. | 0.679 |
COLO4_13717 | COLO4_36942 | A0A1R3JVA9 | A0A1R3G485 | Vesicle transport protein, Use1. | V-SNARE domain-containing protein. | 0.542 |
COLO4_18772 | COLO4_09747 | A0A1R3J7U2 | A0A1R3KB65 | Synaptobrevin; Belongs to the synaptobrevin family. | t-SNARE coiled-coil homology domain-containing protein. | 0.992 |
COLO4_18772 | COLO4_13717 | A0A1R3J7U2 | A0A1R3JVA9 | Synaptobrevin; Belongs to the synaptobrevin family. | Vesicle transport protein, Use1. | 0.939 |
COLO4_18772 | COLO4_27977 | A0A1R3J7U2 | A0A1R3HNP3 | Synaptobrevin; Belongs to the synaptobrevin family. | t-SNARE coiled-coil homology domain-containing protein. | 0.994 |
COLO4_18772 | COLO4_31399 | A0A1R3J7U2 | A0A1R3H4Q4 | Synaptobrevin; Belongs to the synaptobrevin family. | t-SNARE coiled-coil homology domain-containing protein. | 0.991 |
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