STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_34765Uncharacterized protein. (216 aa)    
Predicted Functional Partners:
COLO4_30514
Uncharacterized protein.
  
     0.512
COLO4_32516
Uncharacterized protein.
  
     0.506
COLO4_30002
Uncharacterized protein.
  
     0.505
COLO4_27301
Uncharacterized protein.
  
     0.499
COLO4_04862
Uncharacterized protein.
  
     0.483
COLO4_38439
Uncharacterized protein.
  
     0.477
COLO4_12250
Uncharacterized protein.
  
     0.473
COLO4_15833
Rx_N domain-containing protein.
  
     0.469
COLO4_35653
DNA-binding WRKY.
  
     0.466
COLO4_12881
Cc-nbs-lrr resistance protein.
  
     0.466
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.