Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_05650 | COLO4_10907 | A0A1R3KQA8 | A0A1R3K6H1 | Prefoldin beta-like protein. | Prefoldin beta-like protein. | 0.994 |
COLO4_05650 | COLO4_34610 | A0A1R3KQA8 | A0A1R3GK86 | Prefoldin beta-like protein. | Huntingtin-interacting protein K. | 0.622 |
COLO4_10907 | COLO4_05650 | A0A1R3K6H1 | A0A1R3KQA8 | Prefoldin beta-like protein. | Prefoldin beta-like protein. | 0.994 |
COLO4_10907 | COLO4_19068 | A0A1R3K6H1 | A0A1R3J6W0 | Prefoldin beta-like protein. | Tim10/DDP family zinc finger. | 0.510 |
COLO4_10907 | COLO4_34610 | A0A1R3K6H1 | A0A1R3GK86 | Prefoldin beta-like protein. | Huntingtin-interacting protein K. | 0.584 |
COLO4_13405 | COLO4_16662 | A0A1R3JX42 | A0A1R3JG53 | Sm domain-containing protein. | Tim10/DDP family zinc finger; Belongs to the small Tim family. | 0.621 |
COLO4_13405 | COLO4_18368 | A0A1R3JX42 | A0A1R3J9F4 | Sm domain-containing protein. | Arsenite-resistance protein 2. | 0.803 |
COLO4_13405 | COLO4_24205 | A0A1R3JX42 | A0A1R3IC48 | Sm domain-containing protein. | Uncharacterized protein. | 0.961 |
COLO4_13405 | COLO4_34610 | A0A1R3JX42 | A0A1R3GK86 | Sm domain-containing protein. | Huntingtin-interacting protein K. | 0.579 |
COLO4_15238 | COLO4_30327 | A0A1R3JNP6 | A0A1R3H910 | N-acetyltransferase domain-containing protein. | Tetratricopeptide-like helical. | 0.964 |
COLO4_15238 | COLO4_34610 | A0A1R3JNP6 | A0A1R3GK86 | N-acetyltransferase domain-containing protein. | Huntingtin-interacting protein K. | 0.921 |
COLO4_16662 | COLO4_13405 | A0A1R3JG53 | A0A1R3JX42 | Tim10/DDP family zinc finger; Belongs to the small Tim family. | Sm domain-containing protein. | 0.621 |
COLO4_16662 | COLO4_19068 | A0A1R3JG53 | A0A1R3J6W0 | Tim10/DDP family zinc finger; Belongs to the small Tim family. | Tim10/DDP family zinc finger. | 0.995 |
COLO4_16662 | COLO4_34610 | A0A1R3JG53 | A0A1R3GK86 | Tim10/DDP family zinc finger; Belongs to the small Tim family. | Huntingtin-interacting protein K. | 0.598 |
COLO4_18368 | COLO4_13405 | A0A1R3J9F4 | A0A1R3JX42 | Arsenite-resistance protein 2. | Sm domain-containing protein. | 0.803 |
COLO4_18368 | COLO4_34610 | A0A1R3J9F4 | A0A1R3GK86 | Arsenite-resistance protein 2. | Huntingtin-interacting protein K. | 0.562 |
COLO4_19068 | COLO4_10907 | A0A1R3J6W0 | A0A1R3K6H1 | Tim10/DDP family zinc finger. | Prefoldin beta-like protein. | 0.510 |
COLO4_19068 | COLO4_16662 | A0A1R3J6W0 | A0A1R3JG53 | Tim10/DDP family zinc finger. | Tim10/DDP family zinc finger; Belongs to the small Tim family. | 0.995 |
COLO4_19068 | COLO4_24205 | A0A1R3J6W0 | A0A1R3IC48 | Tim10/DDP family zinc finger. | Uncharacterized protein. | 0.750 |
COLO4_19068 | COLO4_34610 | A0A1R3J6W0 | A0A1R3GK86 | Tim10/DDP family zinc finger. | Huntingtin-interacting protein K. | 0.611 |
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