Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_12801 | COLO4_19047 | A0A1R3JZU2 | A0A1R3J6W6 | Uncharacterized protein. | Nucleic acid binding, tRNA/helicase-type. | 0.913 |
COLO4_12801 | COLO4_33694 | A0A1R3JZU2 | A0A1R3GSC0 | Uncharacterized protein. | Retrotran_gag_3 domain-containing protein. | 0.424 |
COLO4_12801 | COLO4_37640 | A0A1R3JZU2 | A0A1R3G091 | Uncharacterized protein. | Zinc finger, CCHC-type. | 0.424 |
COLO4_12801 | COLO4_37720 | A0A1R3JZU2 | A0A1R3FZT6 | Uncharacterized protein. | Nucleic acid binding, tRNA/helicase-type. | 0.913 |
COLO4_19047 | COLO4_12801 | A0A1R3J6W6 | A0A1R3JZU2 | Nucleic acid binding, tRNA/helicase-type. | Uncharacterized protein. | 0.913 |
COLO4_19047 | COLO4_33694 | A0A1R3J6W6 | A0A1R3GSC0 | Nucleic acid binding, tRNA/helicase-type. | Retrotran_gag_3 domain-containing protein. | 0.428 |
COLO4_19047 | COLO4_37640 | A0A1R3J6W6 | A0A1R3G091 | Nucleic acid binding, tRNA/helicase-type. | Zinc finger, CCHC-type. | 0.428 |
COLO4_19047 | COLO4_37720 | A0A1R3J6W6 | A0A1R3FZT6 | Nucleic acid binding, tRNA/helicase-type. | Nucleic acid binding, tRNA/helicase-type. | 0.892 |
COLO4_20882 | COLO4_33694 | A0A1R3IWC8 | A0A1R3GSC0 | DUF659 domain-containing protein. | Retrotran_gag_3 domain-containing protein. | 0.440 |
COLO4_20882 | COLO4_33756 | A0A1R3IWC8 | A0A1R3GRZ0 | DUF659 domain-containing protein. | Putative Zinc finger, BED-type. | 0.407 |
COLO4_30259 | COLO4_33694 | A0A1R3H9M9 | A0A1R3GSC0 | Uncharacterized protein. | Retrotran_gag_3 domain-containing protein. | 0.458 |
COLO4_33694 | COLO4_12801 | A0A1R3GSC0 | A0A1R3JZU2 | Retrotran_gag_3 domain-containing protein. | Uncharacterized protein. | 0.424 |
COLO4_33694 | COLO4_19047 | A0A1R3GSC0 | A0A1R3J6W6 | Retrotran_gag_3 domain-containing protein. | Nucleic acid binding, tRNA/helicase-type. | 0.428 |
COLO4_33694 | COLO4_20882 | A0A1R3GSC0 | A0A1R3IWC8 | Retrotran_gag_3 domain-containing protein. | DUF659 domain-containing protein. | 0.440 |
COLO4_33694 | COLO4_30259 | A0A1R3GSC0 | A0A1R3H9M9 | Retrotran_gag_3 domain-containing protein. | Uncharacterized protein. | 0.458 |
COLO4_33694 | COLO4_33756 | A0A1R3GSC0 | A0A1R3GRZ0 | Retrotran_gag_3 domain-containing protein. | Putative Zinc finger, BED-type. | 0.462 |
COLO4_33694 | COLO4_37640 | A0A1R3GSC0 | A0A1R3G091 | Retrotran_gag_3 domain-containing protein. | Zinc finger, CCHC-type. | 0.472 |
COLO4_33694 | COLO4_37720 | A0A1R3GSC0 | A0A1R3FZT6 | Retrotran_gag_3 domain-containing protein. | Nucleic acid binding, tRNA/helicase-type. | 0.428 |
COLO4_33756 | COLO4_20882 | A0A1R3GRZ0 | A0A1R3IWC8 | Putative Zinc finger, BED-type. | DUF659 domain-containing protein. | 0.407 |
COLO4_33756 | COLO4_33694 | A0A1R3GRZ0 | A0A1R3GSC0 | Putative Zinc finger, BED-type. | Retrotran_gag_3 domain-containing protein. | 0.462 |
page 1 of 2