STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_33549Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (183 aa)    
Predicted Functional Partners:
COLO4_25521
Aspartate/glutamate/uridylate kinase.
    
 0.961
COLO4_14726
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
    
 0.961
COLO4_12338
Sugar isomerase (SIS).
  
 
 0.894
COLO4_36598
Glutamine amidotransferase type-2 domain-containing protein.
  
 
 0.887
COLO4_24721
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.881
COLO4_32650
Uncharacterized protein.
     
 0.871
COLO4_10616
Glutamine amidotransferase type-2 domain-containing protein.
    
 0.871
COLO4_21057
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.869
COLO4_32786
Uncharacterized protein.
  
 
 0.860
COLO4_22427
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.860
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.