STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_33521Carbohydrate binding module family 20. (87 aa)    
Predicted Functional Partners:
COLO4_31413
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.959
COLO4_12004
Aamy domain-containing protein.
  
 
 0.952
COLO4_09141
Aamy domain-containing protein.
  
 
 0.948
COLO4_31779
Glycosyl transferase, family 1.
  
 
 0.947
COLO4_11664
Chromatin SPT2.
  
 
 0.947
COLO4_29795
Aamy domain-containing protein.
  
 
 0.944
COLO4_23451
Glycosyl hydrolase, family 13, all-beta.
  
 
 0.943
COLO4_09699
Uncharacterized protein.
  
 
 0.942
COLO4_26062
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.939
COLO4_05220
Aamy domain-containing protein.
  
 
 0.938
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
Server load: low (16%) [HD]