Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_00171 | COLO4_07885 | A0A1R3L4F0 | A0A1R3KI70 | PGG domain-containing protein. | Late embryogenesis abundant protein, LEA-14. | 0.501 |
COLO4_00171 | COLO4_10565 | A0A1R3L4F0 | A0A1R3K816 | PGG domain-containing protein. | Concanavalin A-like lectin/glucanase, subgroup. | 0.536 |
COLO4_00171 | COLO4_13218 | A0A1R3L4F0 | A0A1R3JXI1 | PGG domain-containing protein. | Uncharacterized protein. | 0.539 |
COLO4_00171 | COLO4_16518 | A0A1R3L4F0 | A0A1R3JH11 | PGG domain-containing protein. | EF-hand domain-containing protein. | 0.545 |
COLO4_00171 | COLO4_24905 | A0A1R3L4F0 | A0A1R3I5Z4 | PGG domain-containing protein. | DUF4101 domain-containing protein. | 0.464 |
COLO4_00171 | COLO4_33295 | A0A1R3L4F0 | A0A1R3GUZ3 | PGG domain-containing protein. | Ribosomal protein L34Ae. | 0.428 |
COLO4_00171 | COLO4_33484 | A0A1R3L4F0 | A0A1R3GT35 | PGG domain-containing protein. | Annexin. | 0.538 |
COLO4_06680 | COLO4_07885 | A0A1R3KM87 | A0A1R3KI70 | PGG domain-containing protein. | Late embryogenesis abundant protein, LEA-14. | 0.510 |
COLO4_06680 | COLO4_10565 | A0A1R3KM87 | A0A1R3K816 | PGG domain-containing protein. | Concanavalin A-like lectin/glucanase, subgroup. | 0.541 |
COLO4_06680 | COLO4_13218 | A0A1R3KM87 | A0A1R3JXI1 | PGG domain-containing protein. | Uncharacterized protein. | 0.549 |
COLO4_06680 | COLO4_16518 | A0A1R3KM87 | A0A1R3JH11 | PGG domain-containing protein. | EF-hand domain-containing protein. | 0.569 |
COLO4_06680 | COLO4_24905 | A0A1R3KM87 | A0A1R3I5Z4 | PGG domain-containing protein. | DUF4101 domain-containing protein. | 0.495 |
COLO4_06680 | COLO4_33295 | A0A1R3KM87 | A0A1R3GUZ3 | PGG domain-containing protein. | Ribosomal protein L34Ae. | 0.424 |
COLO4_06680 | COLO4_33484 | A0A1R3KM87 | A0A1R3GT35 | PGG domain-containing protein. | Annexin. | 0.528 |
COLO4_07885 | COLO4_00171 | A0A1R3KI70 | A0A1R3L4F0 | Late embryogenesis abundant protein, LEA-14. | PGG domain-containing protein. | 0.501 |
COLO4_07885 | COLO4_06680 | A0A1R3KI70 | A0A1R3KM87 | Late embryogenesis abundant protein, LEA-14. | PGG domain-containing protein. | 0.510 |
COLO4_07885 | COLO4_10565 | A0A1R3KI70 | A0A1R3K816 | Late embryogenesis abundant protein, LEA-14. | Concanavalin A-like lectin/glucanase, subgroup. | 0.541 |
COLO4_07885 | COLO4_13218 | A0A1R3KI70 | A0A1R3JXI1 | Late embryogenesis abundant protein, LEA-14. | Uncharacterized protein. | 0.525 |
COLO4_07885 | COLO4_16518 | A0A1R3KI70 | A0A1R3JH11 | Late embryogenesis abundant protein, LEA-14. | EF-hand domain-containing protein. | 0.505 |
COLO4_07885 | COLO4_24905 | A0A1R3KI70 | A0A1R3I5Z4 | Late embryogenesis abundant protein, LEA-14. | DUF4101 domain-containing protein. | 0.498 |
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