Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_13405 | COLO4_22865 | A0A1R3JX42 | A0A1R3IJG6 | Sm domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
COLO4_13405 | COLO4_24273 | A0A1R3JX42 | A0A1R3IBW0 | Sm domain-containing protein. | Leucine-rich repeat, typical subtype. | 0.504 |
COLO4_13405 | COLO4_26893 | A0A1R3JX42 | A0A1R3HTU6 | Sm domain-containing protein. | Sm domain-containing protein. | 0.999 |
COLO4_13405 | COLO4_29700 | A0A1R3JX42 | A0A1R3HDB8 | Sm domain-containing protein. | Small nuclear ribonucleoprotein G. | 0.999 |
COLO4_13405 | COLO4_33294 | A0A1R3JX42 | A0A1R3GUZ7 | Sm domain-containing protein. | Uncharacterized protein. | 0.504 |
COLO4_17702 | COLO4_24273 | A0A1R3JBS5 | A0A1R3IBW0 | Translation elongation factor EF1B, gamma chain, conserved. | Leucine-rich repeat, typical subtype. | 0.515 |
COLO4_17702 | COLO4_33294 | A0A1R3JBS5 | A0A1R3GUZ7 | Translation elongation factor EF1B, gamma chain, conserved. | Uncharacterized protein. | 0.515 |
COLO4_20694 | COLO4_20695 | A0A1R3IXQ1 | A0A1R3IXL4 | Putative ankyrin-repeat containing protein. | Uncharacterized protein. | 0.959 |
COLO4_20694 | COLO4_24273 | A0A1R3IXQ1 | A0A1R3IBW0 | Putative ankyrin-repeat containing protein. | Leucine-rich repeat, typical subtype. | 0.473 |
COLO4_20694 | COLO4_33294 | A0A1R3IXQ1 | A0A1R3GUZ7 | Putative ankyrin-repeat containing protein. | Uncharacterized protein. | 0.473 |
COLO4_20694 | COLO4_33299 | A0A1R3IXQ1 | A0A1R3GV84 | Putative ankyrin-repeat containing protein. | Tyrosine-protein phosphatase non-receptor type 20-like protein. | 0.437 |
COLO4_20695 | COLO4_20694 | A0A1R3IXL4 | A0A1R3IXQ1 | Uncharacterized protein. | Putative ankyrin-repeat containing protein. | 0.959 |
COLO4_20695 | COLO4_24273 | A0A1R3IXL4 | A0A1R3IBW0 | Uncharacterized protein. | Leucine-rich repeat, typical subtype. | 0.473 |
COLO4_20695 | COLO4_33294 | A0A1R3IXL4 | A0A1R3GUZ7 | Uncharacterized protein. | Uncharacterized protein. | 0.473 |
COLO4_20695 | COLO4_33299 | A0A1R3IXL4 | A0A1R3GV84 | Uncharacterized protein. | Tyrosine-protein phosphatase non-receptor type 20-like protein. | 0.437 |
COLO4_22865 | COLO4_13405 | A0A1R3IJG6 | A0A1R3JX42 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Sm domain-containing protein. | 0.999 |
COLO4_22865 | COLO4_24273 | A0A1R3IJG6 | A0A1R3IBW0 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Leucine-rich repeat, typical subtype. | 0.512 |
COLO4_22865 | COLO4_26893 | A0A1R3IJG6 | A0A1R3HTU6 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Sm domain-containing protein. | 0.999 |
COLO4_22865 | COLO4_29700 | A0A1R3IJG6 | A0A1R3HDB8 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein G. | 0.999 |
COLO4_22865 | COLO4_33294 | A0A1R3IJG6 | A0A1R3GUZ7 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Uncharacterized protein. | 0.512 |
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