STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_32998F-box domain-containing protein. (215 aa)    
Predicted Functional Partners:
COLO4_13140
Bet_v_1 domain-containing protein.
  
     0.523
COLO4_13142
Bet_v_1 domain-containing protein.
  
     0.522
COLO4_19953
Terpene_synth_C domain-containing protein.
  
     0.521
COLO4_13138
Bet_v_1 domain-containing protein.
  
     0.517
COLO4_37071
UDP-glucuronosyl/UDP-glucosyltransferase.
  
     0.515
COLO4_13137
Bet_v_1 domain-containing protein.
  
     0.514
COLO4_13145
Bet_v_1 domain-containing protein.
  
     0.514
COLO4_13141
Bet_v_1 domain-containing protein.
  
     0.511
COLO4_03379
ABC transporter B family member 15-like protein.
  
     0.510
COLO4_13813
Bet_v_1 domain-containing protein.
  
     0.500
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.