Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_00389 | COLO4_31895 | A0A1R3L402 | A0A1R3H2Z9 | F-box domain-containing protein. | F-box domain-containing protein. | 0.481 |
COLO4_10687 | COLO4_27182 | A0A1R3K7L1 | A0A1R3HS99 | Putative DNA binding protein. | VQ motif-containing protein. | 0.479 |
COLO4_10687 | COLO4_30185 | A0A1R3K7L1 | A0A1R3HAM7 | Putative DNA binding protein. | DUF1421 domain-containing protein. | 0.482 |
COLO4_10687 | COLO4_31895 | A0A1R3K7L1 | A0A1R3H2Z9 | Putative DNA binding protein. | F-box domain-containing protein. | 0.477 |
COLO4_16363 | COLO4_31895 | A0A1R3JHM6 | A0A1R3H2Z9 | F-box domain-containing protein. | F-box domain-containing protein. | 0.477 |
COLO4_22116 | COLO4_31895 | A0A1R3INZ3 | A0A1R3H2Z9 | Transcription factor GRAS; Belongs to the GRAS family. | F-box domain-containing protein. | 0.451 |
COLO4_23797 | COLO4_27038 | A0A1R3IEJ5 | A0A1R3HT32 | Uncharacterized protein. | Methyltransferase type 11. | 0.468 |
COLO4_23797 | COLO4_31895 | A0A1R3IEJ5 | A0A1R3H2Z9 | Uncharacterized protein. | F-box domain-containing protein. | 0.447 |
COLO4_27038 | COLO4_23797 | A0A1R3HT32 | A0A1R3IEJ5 | Methyltransferase type 11. | Uncharacterized protein. | 0.468 |
COLO4_27038 | COLO4_31895 | A0A1R3HT32 | A0A1R3H2Z9 | Methyltransferase type 11. | F-box domain-containing protein. | 0.501 |
COLO4_27038 | COLO4_31928 | A0A1R3HT32 | A0A1R3H2W9 | Methyltransferase type 11. | Metal ion binding protein. | 0.414 |
COLO4_27182 | COLO4_10687 | A0A1R3HS99 | A0A1R3K7L1 | VQ motif-containing protein. | Putative DNA binding protein. | 0.479 |
COLO4_27182 | COLO4_30185 | A0A1R3HS99 | A0A1R3HAM7 | VQ motif-containing protein. | DUF1421 domain-containing protein. | 0.408 |
COLO4_27182 | COLO4_31895 | A0A1R3HS99 | A0A1R3H2Z9 | VQ motif-containing protein. | F-box domain-containing protein. | 0.440 |
COLO4_30185 | COLO4_10687 | A0A1R3HAM7 | A0A1R3K7L1 | DUF1421 domain-containing protein. | Putative DNA binding protein. | 0.482 |
COLO4_30185 | COLO4_27182 | A0A1R3HAM7 | A0A1R3HS99 | DUF1421 domain-containing protein. | VQ motif-containing protein. | 0.408 |
COLO4_30185 | COLO4_31895 | A0A1R3HAM7 | A0A1R3H2Z9 | DUF1421 domain-containing protein. | F-box domain-containing protein. | 0.456 |
COLO4_31895 | COLO4_00389 | A0A1R3H2Z9 | A0A1R3L402 | F-box domain-containing protein. | F-box domain-containing protein. | 0.481 |
COLO4_31895 | COLO4_10687 | A0A1R3H2Z9 | A0A1R3K7L1 | F-box domain-containing protein. | Putative DNA binding protein. | 0.477 |
COLO4_31895 | COLO4_16363 | A0A1R3H2Z9 | A0A1R3JHM6 | F-box domain-containing protein. | F-box domain-containing protein. | 0.477 |
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