Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_18091 | COLO4_22470 | A0A1R3JAC4 | A0A1R3ILN1 | Zinc finger, RING/FYVE/PHD-type. | SKP1 component; Belongs to the SKP1 family. | 0.910 |
COLO4_18091 | COLO4_24574 | A0A1R3JAC4 | A0A1R3I938 | Zinc finger, RING/FYVE/PHD-type. | SKP1 component; Belongs to the SKP1 family. | 0.869 |
COLO4_18091 | COLO4_26111 | A0A1R3JAC4 | A0A1R3HYR2 | Zinc finger, RING/FYVE/PHD-type. | SKP1 component; Belongs to the SKP1 family. | 0.869 |
COLO4_18091 | COLO4_28042 | A0A1R3JAC4 | A0A1R3HN05 | Zinc finger, RING/FYVE/PHD-type. | SKP1 component. | 0.869 |
COLO4_18091 | COLO4_31143 | A0A1R3JAC4 | A0A1R3H5E8 | Zinc finger, RING/FYVE/PHD-type. | SKP1 component; Belongs to the SKP1 family. | 0.869 |
COLO4_18091 | COLO4_31329 | A0A1R3JAC4 | A0A1R3H4P9 | Zinc finger, RING/FYVE/PHD-type. | Leucine-rich repeat, cysteine-containing subtype. | 0.490 |
COLO4_18091 | COLO4_35472 | A0A1R3JAC4 | A0A1R3GGM2 | Zinc finger, RING/FYVE/PHD-type. | SKP1 component; Belongs to the SKP1 family. | 0.869 |
COLO4_18091 | COLO4_38174 | A0A1R3JAC4 | A0A1R3FWI5 | Zinc finger, RING/FYVE/PHD-type. | SKP1 component; Belongs to the SKP1 family. | 0.869 |
COLO4_18362 | COLO4_31329 | A0A1R3J9D7 | A0A1R3H4P9 | Uncharacterized protein. | Leucine-rich repeat, cysteine-containing subtype. | 0.440 |
COLO4_22470 | COLO4_18091 | A0A1R3ILN1 | A0A1R3JAC4 | SKP1 component; Belongs to the SKP1 family. | Zinc finger, RING/FYVE/PHD-type. | 0.910 |
COLO4_22470 | COLO4_31329 | A0A1R3ILN1 | A0A1R3H4P9 | SKP1 component; Belongs to the SKP1 family. | Leucine-rich repeat, cysteine-containing subtype. | 0.403 |
COLO4_22470 | COLO4_31771 | A0A1R3ILN1 | A0A1R3H3I7 | SKP1 component; Belongs to the SKP1 family. | Zinc finger, RING/FYVE/PHD-type. | 0.910 |
COLO4_24574 | COLO4_18091 | A0A1R3I938 | A0A1R3JAC4 | SKP1 component; Belongs to the SKP1 family. | Zinc finger, RING/FYVE/PHD-type. | 0.869 |
COLO4_24574 | COLO4_31329 | A0A1R3I938 | A0A1R3H4P9 | SKP1 component; Belongs to the SKP1 family. | Leucine-rich repeat, cysteine-containing subtype. | 0.403 |
COLO4_24574 | COLO4_31771 | A0A1R3I938 | A0A1R3H3I7 | SKP1 component; Belongs to the SKP1 family. | Zinc finger, RING/FYVE/PHD-type. | 0.869 |
COLO4_26111 | COLO4_18091 | A0A1R3HYR2 | A0A1R3JAC4 | SKP1 component; Belongs to the SKP1 family. | Zinc finger, RING/FYVE/PHD-type. | 0.869 |
COLO4_26111 | COLO4_31329 | A0A1R3HYR2 | A0A1R3H4P9 | SKP1 component; Belongs to the SKP1 family. | Leucine-rich repeat, cysteine-containing subtype. | 0.403 |
COLO4_26111 | COLO4_31771 | A0A1R3HYR2 | A0A1R3H3I7 | SKP1 component; Belongs to the SKP1 family. | Zinc finger, RING/FYVE/PHD-type. | 0.869 |
COLO4_28042 | COLO4_18091 | A0A1R3HN05 | A0A1R3JAC4 | SKP1 component. | Zinc finger, RING/FYVE/PHD-type. | 0.869 |
COLO4_28042 | COLO4_31329 | A0A1R3HN05 | A0A1R3H4P9 | SKP1 component. | Leucine-rich repeat, cysteine-containing subtype. | 0.403 |
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