Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_08997 | COLO4_31207 | A0A1R3KDM5 | A0A1R3H5F4 | Uncharacterized protein. | PAP/25A-associated. | 0.554 |
COLO4_11404 | COLO4_31207 | A0A1R3K4K1 | A0A1R3H5F4 | Uncharacterized protein. | PAP/25A-associated. | 0.554 |
COLO4_12189 | COLO4_31207 | A0A1R3K1V7 | A0A1R3H5F4 | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. | PAP/25A-associated. | 0.582 |
COLO4_21164 | COLO4_31207 | A0A1R3IV35 | A0A1R3H5F4 | SAM domain-containing protein. | PAP/25A-associated. | 0.708 |
COLO4_25236 | COLO4_31207 | A0A1R3I3Y1 | A0A1R3H5F4 | Putative DNA cross-link repair protein pso2/snm1. | PAP/25A-associated. | 0.708 |
COLO4_28587 | COLO4_31207 | A0A1R3HJF4 | A0A1R3H5F4 | HAD-superfamily hydrolase, subfamily IIA. | PAP/25A-associated. | 0.563 |
COLO4_31114 | COLO4_31207 | A0A1R3H5S2 | A0A1R3H5F4 | RRM domain-containing protein. | PAP/25A-associated. | 0.690 |
COLO4_31207 | COLO4_08997 | A0A1R3H5F4 | A0A1R3KDM5 | PAP/25A-associated. | Uncharacterized protein. | 0.554 |
COLO4_31207 | COLO4_11404 | A0A1R3H5F4 | A0A1R3K4K1 | PAP/25A-associated. | Uncharacterized protein. | 0.554 |
COLO4_31207 | COLO4_12189 | A0A1R3H5F4 | A0A1R3K1V7 | PAP/25A-associated. | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. | 0.582 |
COLO4_31207 | COLO4_21164 | A0A1R3H5F4 | A0A1R3IV35 | PAP/25A-associated. | SAM domain-containing protein. | 0.708 |
COLO4_31207 | COLO4_25236 | A0A1R3H5F4 | A0A1R3I3Y1 | PAP/25A-associated. | Putative DNA cross-link repair protein pso2/snm1. | 0.708 |
COLO4_31207 | COLO4_28587 | A0A1R3H5F4 | A0A1R3HJF4 | PAP/25A-associated. | HAD-superfamily hydrolase, subfamily IIA. | 0.563 |
COLO4_31207 | COLO4_31114 | A0A1R3H5F4 | A0A1R3H5S2 | PAP/25A-associated. | RRM domain-containing protein. | 0.690 |
COLO4_31207 | COLO4_31949 | A0A1R3H5F4 | A0A1R3H2S0 | PAP/25A-associated. | HAD-superfamily hydrolase, subfamily IIA. | 0.563 |
COLO4_31207 | COLO4_31971 | A0A1R3H5F4 | A0A1R3H2X8 | PAP/25A-associated. | Uncharacterized protein. | 0.563 |
COLO4_31207 | COLO4_32079 | A0A1R3H5F4 | A0A1R3H1R9 | PAP/25A-associated. | Phosphoglycolate phosphatase. | 0.563 |
COLO4_31949 | COLO4_31207 | A0A1R3H2S0 | A0A1R3H5F4 | HAD-superfamily hydrolase, subfamily IIA. | PAP/25A-associated. | 0.563 |
COLO4_31949 | COLO4_32079 | A0A1R3H2S0 | A0A1R3H1R9 | HAD-superfamily hydrolase, subfamily IIA. | Phosphoglycolate phosphatase. | 0.811 |
COLO4_31971 | COLO4_31207 | A0A1R3H2X8 | A0A1R3H5F4 | Uncharacterized protein. | PAP/25A-associated. | 0.563 |
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