STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_29551Putative kinase. (137 aa)    
Predicted Functional Partners:
COLO4_13216
Peptidase_M16 domain-containing protein.
  
     0.542
COLO4_24643
Trehalose-phosphatase.
  
     0.541
COLO4_04025
Methyltransferase.
  
     0.541
COLO4_15296
FRIGIDA-like protein; Belongs to the Frigida family.
  
     0.540
COLO4_14272
Methyltransferase.
  
     0.540
COLO4_23786
Putative rhamnose biosynthetic enzyme 1-like protein.
  
     0.539
COLO4_17762
ZF-HD dimerization-type domain-containing protein.
  
     0.539
COLO4_29969
Methyltransferase.
  
     0.538
COLO4_15886
Methyltransferase.
  
     0.538
COLO4_38587
Putative Cell division control protein.
  
     0.537
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.