Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_05379 | COLO4_09327 | A0A1R3KR49 | A0A1R3KCE4 | Alpha/beta hydrolase-1. | Alpha/beta hydrolase-1. | 0.852 |
COLO4_05379 | COLO4_11218 | A0A1R3KR49 | A0A1R3K5D6 | Alpha/beta hydrolase-1. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.510 |
COLO4_05379 | COLO4_18142 | A0A1R3KR49 | A0A1R3JA60 | Alpha/beta hydrolase-1. | Phenylalanine ammonia-lyase. | 0.519 |
COLO4_05379 | COLO4_24913 | A0A1R3KR49 | A0A1R3I5W9 | Alpha/beta hydrolase-1. | Uncharacterized protein. | 0.498 |
COLO4_05379 | COLO4_26682 | A0A1R3KR49 | A0A1R3HV24 | Alpha/beta hydrolase-1. | NAD-dependent epimerase/dehydratase. | 0.508 |
COLO4_05379 | COLO4_28065 | A0A1R3KR49 | A0A1R3HN56 | Alpha/beta hydrolase-1. | AMP-dependent synthetase/ligase. | 0.931 |
COLO4_05379 | COLO4_32633 | A0A1R3KR49 | A0A1R3GYN9 | Alpha/beta hydrolase-1. | O-methyltransferase, family 3. | 0.410 |
COLO4_09327 | COLO4_05379 | A0A1R3KCE4 | A0A1R3KR49 | Alpha/beta hydrolase-1. | Alpha/beta hydrolase-1. | 0.852 |
COLO4_09327 | COLO4_11218 | A0A1R3KCE4 | A0A1R3K5D6 | Alpha/beta hydrolase-1. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.509 |
COLO4_09327 | COLO4_18142 | A0A1R3KCE4 | A0A1R3JA60 | Alpha/beta hydrolase-1. | Phenylalanine ammonia-lyase. | 0.513 |
COLO4_09327 | COLO4_24913 | A0A1R3KCE4 | A0A1R3I5W9 | Alpha/beta hydrolase-1. | Uncharacterized protein. | 0.475 |
COLO4_09327 | COLO4_26682 | A0A1R3KCE4 | A0A1R3HV24 | Alpha/beta hydrolase-1. | NAD-dependent epimerase/dehydratase. | 0.510 |
COLO4_09327 | COLO4_28065 | A0A1R3KCE4 | A0A1R3HN56 | Alpha/beta hydrolase-1. | AMP-dependent synthetase/ligase. | 0.929 |
COLO4_09327 | COLO4_32633 | A0A1R3KCE4 | A0A1R3GYN9 | Alpha/beta hydrolase-1. | O-methyltransferase, family 3. | 0.416 |
COLO4_10905 | COLO4_11218 | A0A1R3K6S0 | A0A1R3K5D6 | Hydrolase_4 domain-containing protein. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.483 |
COLO4_10905 | COLO4_18142 | A0A1R3K6S0 | A0A1R3JA60 | Hydrolase_4 domain-containing protein. | Phenylalanine ammonia-lyase. | 0.465 |
COLO4_10905 | COLO4_26682 | A0A1R3K6S0 | A0A1R3HV24 | Hydrolase_4 domain-containing protein. | NAD-dependent epimerase/dehydratase. | 0.493 |
COLO4_10905 | COLO4_28065 | A0A1R3K6S0 | A0A1R3HN56 | Hydrolase_4 domain-containing protein. | AMP-dependent synthetase/ligase. | 0.929 |
COLO4_10905 | COLO4_32633 | A0A1R3K6S0 | A0A1R3GYN9 | Hydrolase_4 domain-containing protein. | O-methyltransferase, family 3. | 0.408 |
COLO4_10905 | COLO4_34899 | A0A1R3K6S0 | A0A1R3GJ09 | Hydrolase_4 domain-containing protein. | Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. | 0.415 |
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