STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_27898Chromatin modification-related protein EAF7. (68 aa)    
Predicted Functional Partners:
COLO4_36294
Uncharacterized protein.
  
     0.520
COLO4_36292
Uncharacterized protein.
  
     0.518
COLO4_31064
L-gulonolactone oxidase-like protein.
  
     0.516
COLO4_13888
Uncharacterized protein.
  
     0.516
COLO4_29747
L-gulonolactone oxidase-like protein.
  
     0.515
COLO4_35520
Uncharacterized protein.
  
     0.514
COLO4_19048
Uncharacterized protein.
  
     0.498
COLO4_20566
Uncharacterized protein.
  
     0.492
COLO4_05925
zf-CCHC_4 domain-containing protein.
  
     0.487
COLO4_13884
Flowering-promoting factor 1-like protein 3-like protein.
  
     0.486
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.