STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_26419Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
COLO4_32536
Ribosomal protein S14.
   
 0.952
COLO4_25962
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.952
COLO4_10513
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.951
COLO4_30834
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.947
COLO4_29445
Ribosomal protein S5/S7; Belongs to the universal ribosomal protein uS7 family.
   
 0.946
COLO4_27214
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.925
COLO4_19444
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.925
COLO4_29444
Ribosomal protein S28e.
   
 0.924
COLO4_15787
Ribosomal protein S19/S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.924
COLO4_09037
Ribosomal protein S28e.
   
 0.924
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.