STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_26286NmrA-like protein. (100 aa)    
Predicted Functional Partners:
COLO4_32799
Uncharacterized protein.
   
  0.915
COLO4_25975
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.688
COLO4_33034
Thymidine kinase.
     
 0.601
COLO4_31911
Thymidine kinase.
     
 0.601
COLO4_31910
Thymidine kinase.
     
 0.601
COLO4_21259
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent.
    
 0.585
COLO4_15321
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent.
    
 0.585
COLO4_04346
RNA-processing protein, HAT helix.
    
 0.585
COLO4_28809
Peptidase S49.
    
 0.551
COLO4_23604
F-box domain-containing protein.
    
 0.551
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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