Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_04990 | COLO4_09077 | A0A1R3KS70 | A0A1R3KD97 | F-box domain-containing protein. | F-box domain-containing protein. | 0.423 |
COLO4_04990 | COLO4_18091 | A0A1R3KS70 | A0A1R3JAC4 | F-box domain-containing protein. | Zinc finger, RING/FYVE/PHD-type. | 0.756 |
COLO4_04990 | COLO4_19041 | A0A1R3KS70 | A0A1R3J780 | F-box domain-containing protein. | JAB1/Mov34/MPN/PAD-1. | 0.610 |
COLO4_04990 | COLO4_23165 | A0A1R3KS70 | A0A1R3IC31 | F-box domain-containing protein. | Ubiquitin. | 0.549 |
COLO4_04990 | COLO4_26111 | A0A1R3KS70 | A0A1R3HYR2 | F-box domain-containing protein. | SKP1 component; Belongs to the SKP1 family. | 0.890 |
COLO4_04990 | COLO4_31771 | A0A1R3KS70 | A0A1R3H3I7 | F-box domain-containing protein. | Zinc finger, RING/FYVE/PHD-type. | 0.756 |
COLO4_07087 | COLO4_18091 | A0A1R3KKW7 | A0A1R3JAC4 | Ubiquitin. | Zinc finger, RING/FYVE/PHD-type. | 0.913 |
COLO4_07087 | COLO4_19041 | A0A1R3KKW7 | A0A1R3J780 | Ubiquitin. | JAB1/Mov34/MPN/PAD-1. | 0.919 |
COLO4_07087 | COLO4_19215 | A0A1R3KKW7 | A0A1R3J6D0 | Ubiquitin. | Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. | 0.894 |
COLO4_07087 | COLO4_23165 | A0A1R3KKW7 | A0A1R3IC31 | Ubiquitin. | Ubiquitin. | 0.999 |
COLO4_07087 | COLO4_26111 | A0A1R3KKW7 | A0A1R3HYR2 | Ubiquitin. | SKP1 component; Belongs to the SKP1 family. | 0.813 |
COLO4_07087 | COLO4_31771 | A0A1R3KKW7 | A0A1R3H3I7 | Ubiquitin. | Zinc finger, RING/FYVE/PHD-type. | 0.913 |
COLO4_09077 | COLO4_04990 | A0A1R3KD97 | A0A1R3KS70 | F-box domain-containing protein. | F-box domain-containing protein. | 0.423 |
COLO4_09077 | COLO4_18091 | A0A1R3KD97 | A0A1R3JAC4 | F-box domain-containing protein. | Zinc finger, RING/FYVE/PHD-type. | 0.692 |
COLO4_09077 | COLO4_19041 | A0A1R3KD97 | A0A1R3J780 | F-box domain-containing protein. | JAB1/Mov34/MPN/PAD-1. | 0.679 |
COLO4_09077 | COLO4_23165 | A0A1R3KD97 | A0A1R3IC31 | F-box domain-containing protein. | Ubiquitin. | 0.499 |
COLO4_09077 | COLO4_26111 | A0A1R3KD97 | A0A1R3HYR2 | F-box domain-containing protein. | SKP1 component; Belongs to the SKP1 family. | 0.839 |
COLO4_09077 | COLO4_31771 | A0A1R3KD97 | A0A1R3H3I7 | F-box domain-containing protein. | Zinc finger, RING/FYVE/PHD-type. | 0.692 |
COLO4_14341 | COLO4_18091 | A0A1R3HDI7 | A0A1R3JAC4 | Ubiquitin. | Zinc finger, RING/FYVE/PHD-type. | 0.913 |
COLO4_14341 | COLO4_19041 | A0A1R3HDI7 | A0A1R3J780 | Ubiquitin. | JAB1/Mov34/MPN/PAD-1. | 0.919 |
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