Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_10692 | COLO4_26002 | A0A1R3K7B1 | A0A1R3HZ18 | Endoglucanase. | Beta-galactosidase. | 0.641 |
COLO4_13463 | COLO4_20752 | A0A1R3JWX3 | A0A1R3IXD5 | Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich. | Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family. | 0.501 |
COLO4_13463 | COLO4_26002 | A0A1R3JWX3 | A0A1R3HZ18 | Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich. | Beta-galactosidase. | 0.529 |
COLO4_17394 | COLO4_26002 | A0A1R3JCZ0 | A0A1R3HZ18 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Beta-galactosidase. | 0.498 |
COLO4_19157 | COLO4_26002 | A0A1R3J6G8 | A0A1R3HZ18 | Carbohydrate kinase PfkB. | Beta-galactosidase. | 0.498 |
COLO4_20752 | COLO4_13463 | A0A1R3IXD5 | A0A1R3JWX3 | Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family. | Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich. | 0.501 |
COLO4_20752 | COLO4_26002 | A0A1R3IXD5 | A0A1R3HZ18 | Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family. | Beta-galactosidase. | 0.545 |
COLO4_26002 | COLO4_10692 | A0A1R3HZ18 | A0A1R3K7B1 | Beta-galactosidase. | Endoglucanase. | 0.641 |
COLO4_26002 | COLO4_13463 | A0A1R3HZ18 | A0A1R3JWX3 | Beta-galactosidase. | Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich. | 0.529 |
COLO4_26002 | COLO4_17394 | A0A1R3HZ18 | A0A1R3JCZ0 | Beta-galactosidase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.498 |
COLO4_26002 | COLO4_19157 | A0A1R3HZ18 | A0A1R3J6G8 | Beta-galactosidase. | Carbohydrate kinase PfkB. | 0.498 |
COLO4_26002 | COLO4_20752 | A0A1R3HZ18 | A0A1R3IXD5 | Beta-galactosidase. | Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family. | 0.545 |
COLO4_26002 | COLO4_26281 | A0A1R3HZ18 | A0A1R3HY96 | Beta-galactosidase. | Carbohydrate kinase PfkB. | 0.498 |
COLO4_26002 | COLO4_26549 | A0A1R3HZ18 | A0A1R3HWJ8 | Beta-galactosidase. | Putative fructokinase-1-like protein. | 0.498 |
COLO4_26002 | COLO4_26991 | A0A1R3HZ18 | A0A1R3HTF1 | Beta-galactosidase. | Adenosine kinase. | 0.498 |
COLO4_26002 | COLO4_27859 | A0A1R3HZ18 | A0A1R3HNV8 | Beta-galactosidase. | Carbohydrate kinase PfkB. | 0.498 |
COLO4_26002 | COLO4_38480 | A0A1R3HZ18 | A0A1R3FUS5 | Beta-galactosidase. | Adenosine kinase. | 0.498 |
COLO4_26281 | COLO4_26002 | A0A1R3HY96 | A0A1R3HZ18 | Carbohydrate kinase PfkB. | Beta-galactosidase. | 0.498 |
COLO4_26549 | COLO4_26002 | A0A1R3HWJ8 | A0A1R3HZ18 | Putative fructokinase-1-like protein. | Beta-galactosidase. | 0.498 |
COLO4_26991 | COLO4_26002 | A0A1R3HTF1 | A0A1R3HZ18 | Adenosine kinase. | Beta-galactosidase. | 0.498 |
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