Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_06878 | COLO4_17028 | A0A1R3KLV3 | A0A1R3JEL2 | C2 calcium-dependent membrane targeting. | Arf GTPase activating protein. | 0.950 |
COLO4_06878 | COLO4_21780 | A0A1R3KLV3 | A0A1R3IR51 | C2 calcium-dependent membrane targeting. | Arf GTPase activating protein. | 0.698 |
COLO4_06878 | COLO4_25963 | A0A1R3KLV3 | A0A1R3HZ59 | C2 calcium-dependent membrane targeting. | Knottin; Belongs to the DEFL family. | 0.892 |
COLO4_06878 | COLO4_27644 | A0A1R3KLV3 | A0A1R3HPX5 | C2 calcium-dependent membrane targeting. | ANK_REP_REGION domain-containing protein. | 0.698 |
COLO4_06878 | COLO4_27645 | A0A1R3KLV3 | A0A1R3HQ20 | C2 calcium-dependent membrane targeting. | PH domain-containing protein. | 0.698 |
COLO4_06878 | COLO4_37244 | A0A1R3KLV3 | A0A1R3G2P3 | C2 calcium-dependent membrane targeting. | Arf GTPase activating protein. | 0.698 |
COLO4_09085 | COLO4_17028 | A0A1R3KDA3 | A0A1R3JEL2 | Uncharacterized protein. | Arf GTPase activating protein. | 0.607 |
COLO4_09085 | COLO4_25963 | A0A1R3KDA3 | A0A1R3HZ59 | Uncharacterized protein. | Knottin; Belongs to the DEFL family. | 0.896 |
COLO4_09476 | COLO4_17028 | A0A1R3KBY5 | A0A1R3JEL2 | Arf GTPase activating protein. | Arf GTPase activating protein. | 0.890 |
COLO4_09476 | COLO4_21780 | A0A1R3KBY5 | A0A1R3IR51 | Arf GTPase activating protein. | Arf GTPase activating protein. | 0.643 |
COLO4_09476 | COLO4_25963 | A0A1R3KBY5 | A0A1R3HZ59 | Arf GTPase activating protein. | Knottin; Belongs to the DEFL family. | 0.885 |
COLO4_09476 | COLO4_27644 | A0A1R3KBY5 | A0A1R3HPX5 | Arf GTPase activating protein. | ANK_REP_REGION domain-containing protein. | 0.643 |
COLO4_09476 | COLO4_27645 | A0A1R3KBY5 | A0A1R3HQ20 | Arf GTPase activating protein. | PH domain-containing protein. | 0.643 |
COLO4_09476 | COLO4_37244 | A0A1R3KBY5 | A0A1R3G2P3 | Arf GTPase activating protein. | Arf GTPase activating protein. | 0.643 |
COLO4_10231 | COLO4_17028 | A0A1R3K9Q0 | A0A1R3JEL2 | Putative ATP binding protein. | Arf GTPase activating protein. | 0.607 |
COLO4_10231 | COLO4_25963 | A0A1R3K9Q0 | A0A1R3HZ59 | Putative ATP binding protein. | Knottin; Belongs to the DEFL family. | 0.896 |
COLO4_17028 | COLO4_06878 | A0A1R3JEL2 | A0A1R3KLV3 | Arf GTPase activating protein. | C2 calcium-dependent membrane targeting. | 0.950 |
COLO4_17028 | COLO4_09085 | A0A1R3JEL2 | A0A1R3KDA3 | Arf GTPase activating protein. | Uncharacterized protein. | 0.607 |
COLO4_17028 | COLO4_09476 | A0A1R3JEL2 | A0A1R3KBY5 | Arf GTPase activating protein. | Arf GTPase activating protein. | 0.890 |
COLO4_17028 | COLO4_10231 | A0A1R3JEL2 | A0A1R3K9Q0 | Arf GTPase activating protein. | Putative ATP binding protein. | 0.607 |
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