Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_07659 | COLO4_14726 | A0A1R3KJ38 | A0A1R3JQX9 | Uncharacterized protein. | Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. | 0.445 |
COLO4_07659 | COLO4_22162 | A0A1R3KJ38 | A0A1R3INQ8 | Uncharacterized protein. | Uncharacterized protein. | 0.506 |
COLO4_07659 | COLO4_23165 | A0A1R3KJ38 | A0A1R3IC31 | Uncharacterized protein. | Ubiquitin. | 0.990 |
COLO4_07659 | COLO4_24938 | A0A1R3KJ38 | A0A1R3I5X9 | Uncharacterized protein. | Ubiquinol oxidase; Belongs to the alternative oxidase family. | 0.499 |
COLO4_07659 | COLO4_25521 | A0A1R3KJ38 | A0A1R3I201 | Uncharacterized protein. | Aspartate/glutamate/uridylate kinase. | 0.445 |
COLO4_14726 | COLO4_07659 | A0A1R3JQX9 | A0A1R3KJ38 | Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. | Uncharacterized protein. | 0.445 |
COLO4_14726 | COLO4_24938 | A0A1R3JQX9 | A0A1R3I5X9 | Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. | Ubiquinol oxidase; Belongs to the alternative oxidase family. | 0.478 |
COLO4_14726 | COLO4_25521 | A0A1R3JQX9 | A0A1R3I201 | Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. | Aspartate/glutamate/uridylate kinase. | 0.999 |
COLO4_20694 | COLO4_20695 | A0A1R3IXQ1 | A0A1R3IXL4 | Putative ankyrin-repeat containing protein. | Uncharacterized protein. | 0.959 |
COLO4_20694 | COLO4_22162 | A0A1R3IXQ1 | A0A1R3INQ8 | Putative ankyrin-repeat containing protein. | Uncharacterized protein. | 0.941 |
COLO4_20694 | COLO4_23165 | A0A1R3IXQ1 | A0A1R3IC31 | Putative ankyrin-repeat containing protein. | Ubiquitin. | 0.975 |
COLO4_20694 | COLO4_24272 | A0A1R3IXQ1 | A0A1R3IBU6 | Putative ankyrin-repeat containing protein. | Phox/Bem1p. | 0.840 |
COLO4_20694 | COLO4_24938 | A0A1R3IXQ1 | A0A1R3I5X9 | Putative ankyrin-repeat containing protein. | Ubiquinol oxidase; Belongs to the alternative oxidase family. | 0.583 |
COLO4_20694 | COLO4_34797 | A0A1R3IXQ1 | A0A1R3GJH1 | Putative ankyrin-repeat containing protein. | Uncharacterized protein. | 0.933 |
COLO4_20694 | COLO4_36761 | A0A1R3IXQ1 | A0A1R3G5N1 | Putative ankyrin-repeat containing protein. | Zinc finger, ZZ-type. | 0.840 |
COLO4_20695 | COLO4_20694 | A0A1R3IXL4 | A0A1R3IXQ1 | Uncharacterized protein. | Putative ankyrin-repeat containing protein. | 0.959 |
COLO4_20695 | COLO4_22162 | A0A1R3IXL4 | A0A1R3INQ8 | Uncharacterized protein. | Uncharacterized protein. | 0.929 |
COLO4_20695 | COLO4_23165 | A0A1R3IXL4 | A0A1R3IC31 | Uncharacterized protein. | Ubiquitin. | 0.975 |
COLO4_20695 | COLO4_24272 | A0A1R3IXL4 | A0A1R3IBU6 | Uncharacterized protein. | Phox/Bem1p. | 0.840 |
COLO4_20695 | COLO4_24938 | A0A1R3IXL4 | A0A1R3I5X9 | Uncharacterized protein. | Ubiquinol oxidase; Belongs to the alternative oxidase family. | 0.583 |
page 1 of 4