STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_24708Uncharacterized protein. (678 aa)    
Predicted Functional Partners:
COLO4_24707
DUF632 domain-containing protein.
 
     0.722
COLO4_26168
Auxin responsive SAUR protein.
  
     0.498
COLO4_18195
DUF4408 domain-containing protein.
  
     0.485
COLO4_08368
Protein BYPASS-related protein.
  
     0.478
COLO4_12991
Putative Auxin-induced protein 5NG4.
  
     0.462
COLO4_32022
WAT1-related protein.
  
     0.458
COLO4_26793
EGF-like calcium-binding protein.
  
    0.453
COLO4_26794
Wall-associated kinase.
  
    0.446
COLO4_12714
Protein PAIR1-like protein.
  
     0.442
COLO4_28380
Uncharacterized protein.
  
     0.434
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.