STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_24436Uncharacterized protein. (191 aa)    
Predicted Functional Partners:
COLO4_37707
Uncharacterized protein.
  
 
  0.640
COLO4_20699
DOG1 domain-containing protein.
  
 
  0.631
COLO4_10101
Cellulose synthase.
  
 
  0.587
COLO4_14905
LRAT domain-containing protein.
  
 
   0.582
COLO4_24087
Protein kinase domain-containing protein.
  
 
  0.579
COLO4_29304
Polyadenylate-binding protein/Hyperplastic disc protein.
  
 
   0.576
COLO4_15382
LRAT domain-containing protein.
  
 
   0.573
COLO4_13357
Uncharacterized protein.
  
 
  0.573
COLO4_03313
Uncharacterized protein.
  
 
  0.573
COLO4_06549
Cellulose synthase; Belongs to the glycosyltransferase 2 family.
  
 
  0.567
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.