STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_24214ATP-grasp, succinyl-CoA synthetase-type. (423 aa)    
Predicted Functional Partners:
COLO4_34613
Citrate synthase-like protein.
 
 
 0.995
COLO4_26822
Citrate synthase; Belongs to the citrate synthase family.
  
 0.990
COLO4_33052
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 0.988
COLO4_06072
DUF1084 domain-containing protein.
  
 0.988
COLO4_34367
Uncharacterized protein.
  
 0.984
COLO4_33706
Citrate synthase.
  
 0.984
COLO4_30244
Citrate synthase-like protein.
  
 0.984
COLO4_28976
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
  
 0.974
COLO4_08133
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.970
COLO4_07907
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.970
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.