STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_23349Complex 1 LYR protein; Belongs to the complex I LYR family. (105 aa)    
Predicted Functional Partners:
COLO4_09965
Nucleotide-binding, alpha-beta plait.
   
 
 0.924
COLO4_13264
Ribosomal protein L27.
   
 
 0.923
COLO4_29520
Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.915
COLO4_24762
Ribosomal protein L29.
   
 
 0.911
COLO4_08144
L51_S25_CI-B8 domain-containing protein.
   
   0.905
COLO4_11171
Ribosomal protein S23/S29, mitochondrial.
   
 
 0.903
COLO4_12008
Ribosomal protein L27/L41, mitochondrial.
   
 
 0.895
COLO4_36891
Ribosomal protein S27/S33, mitochondrial.
   
   0.894
COLO4_35113
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.894
COLO4_19238
Ribosomal protein L46.
   
 
 0.894
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.