STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_23214Ribonuclease P/MRP, subunit POP1. (861 aa)    
Predicted Functional Partners:
COLO4_18417
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
   
 0.996
COLO4_06720
Uncharacterized protein.
   
 0.996
COLO4_09627
Uncharacterized protein.
    
 0.995
COLO4_27076
Uncharacterized protein.
   
 0.994
COLO4_36609
KRR1 interacting protein 1.
   
  0.991
COLO4_23128
Ribosomal protein L7Ae/L30e/S12e/Gadd45.
    
 0.974
COLO4_07527
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.974
COLO4_17903
DNA/RNA-binding protein Alba-like protein.
    
 0.966
COLO4_12279
DNA/RNA-binding protein Alba-like protein.
    
 0.966
COLO4_03021
DNA/RNA-binding protein Alba-like protein.
    
 0.966
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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