STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_22938Photosystem II PsbQ, oxygen evolving complex. (205 aa)    
Predicted Functional Partners:
COLO4_09556
Photosystem II PsbQ, oxygen evolving complex.
  
 0.996
COLO4_14921
Photosystem II PsbP, oxygen evolving complex.
   
 0.978
COLO4_15765
Uncharacterized protein.
  
 
 0.971
COLO4_13607
Uncharacterized protein.
  
 
 0.969
COLO4_18067
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
 0.967
COLO4_28333
Uncharacterized protein.
  
 
 0.964
COLO4_11054
Peptidylprolyl isomerase.
   
 
 0.964
COLO4_13101
Uncharacterized protein.
   
 
 0.962
COLO4_11231
NAD(P)H-quinone oxidoreductase, subunit N.
   
 
 0.958
COLO4_07353
Photosystem I PsaL, reaction centre subunit XI.
   
 0.958
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.