Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_05693 | COLO4_06793 | A0A1R3KQ40 | A0A1R3KLZ1 | Dimer_Tnp_hAT domain-containing protein. | DUF4413 domain-containing protein. | 0.421 |
COLO4_05693 | COLO4_16698 | A0A1R3KQ40 | A0A1R3JFY7 | Dimer_Tnp_hAT domain-containing protein. | DUF4413 domain-containing protein. | 0.511 |
COLO4_05693 | COLO4_22696 | A0A1R3KQ40 | A0A1R3IKI6 | Dimer_Tnp_hAT domain-containing protein. | Putative Zinc finger, BED-type. | 0.445 |
COLO4_05693 | COLO4_24531 | A0A1R3KQ40 | A0A1R3I992 | Dimer_Tnp_hAT domain-containing protein. | DUF4413 domain-containing protein. | 0.459 |
COLO4_05693 | COLO4_25807 | A0A1R3KQ40 | A0A1R3HZT9 | Dimer_Tnp_hAT domain-containing protein. | Putative Zinc finger, BED-type. | 0.497 |
COLO4_05693 | COLO4_29018 | A0A1R3KQ40 | A0A1R3HGV5 | Dimer_Tnp_hAT domain-containing protein. | Putative Zinc finger, BED-type. | 0.491 |
COLO4_05693 | COLO4_30238 | A0A1R3KQ40 | A0A1R3H9R6 | Dimer_Tnp_hAT domain-containing protein. | DUF4413 domain-containing protein. | 0.446 |
COLO4_05693 | COLO4_32556 | A0A1R3KQ40 | A0A1R3GZ64 | Dimer_Tnp_hAT domain-containing protein. | Putative Zinc finger, BED-type. | 0.496 |
COLO4_06793 | COLO4_05693 | A0A1R3KLZ1 | A0A1R3KQ40 | DUF4413 domain-containing protein. | Dimer_Tnp_hAT domain-containing protein. | 0.421 |
COLO4_06793 | COLO4_15547 | A0A1R3KLZ1 | A0A1R3JMH4 | DUF4413 domain-containing protein. | Zinc finger, PMZ-type. | 0.483 |
COLO4_06793 | COLO4_22696 | A0A1R3KLZ1 | A0A1R3IKI6 | DUF4413 domain-containing protein. | Putative Zinc finger, BED-type. | 0.462 |
COLO4_06793 | COLO4_29018 | A0A1R3KLZ1 | A0A1R3HGV5 | DUF4413 domain-containing protein. | Putative Zinc finger, BED-type. | 0.460 |
COLO4_15547 | COLO4_06793 | A0A1R3JMH4 | A0A1R3KLZ1 | Zinc finger, PMZ-type. | DUF4413 domain-containing protein. | 0.483 |
COLO4_15547 | COLO4_16698 | A0A1R3JMH4 | A0A1R3JFY7 | Zinc finger, PMZ-type. | DUF4413 domain-containing protein. | 0.405 |
COLO4_15547 | COLO4_22696 | A0A1R3JMH4 | A0A1R3IKI6 | Zinc finger, PMZ-type. | Putative Zinc finger, BED-type. | 0.441 |
COLO4_15547 | COLO4_24531 | A0A1R3JMH4 | A0A1R3I992 | Zinc finger, PMZ-type. | DUF4413 domain-containing protein. | 0.431 |
COLO4_16698 | COLO4_05693 | A0A1R3JFY7 | A0A1R3KQ40 | DUF4413 domain-containing protein. | Dimer_Tnp_hAT domain-containing protein. | 0.511 |
COLO4_16698 | COLO4_15547 | A0A1R3JFY7 | A0A1R3JMH4 | DUF4413 domain-containing protein. | Zinc finger, PMZ-type. | 0.405 |
COLO4_16698 | COLO4_22696 | A0A1R3JFY7 | A0A1R3IKI6 | DUF4413 domain-containing protein. | Putative Zinc finger, BED-type. | 0.451 |
COLO4_16698 | COLO4_29018 | A0A1R3JFY7 | A0A1R3HGV5 | DUF4413 domain-containing protein. | Putative Zinc finger, BED-type. | 0.538 |
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