STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_22376Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. (1089 aa)    
Predicted Functional Partners:
COLO4_22572
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.718
COLO4_25405
Serine/threonine-protein phosphatase.
    
 0.626
COLO4_08050
Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase.
    
 0.626
COLO4_08049
Metallophos domain-containing protein.
    
 0.626
COLO4_29450
Transcription factor TGA1.
  
 
  0.624
COLO4_22162
Uncharacterized protein.
    
  0.615
COLO4_23969
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
0.613
COLO4_04855
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
0.613
COLO4_20699
DOG1 domain-containing protein.
  
 
  0.608
COLO4_19887
DOG1 domain-containing protein.
  
 
  0.603
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.