Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_17143 | COLO4_22247 | A0A1R3JE12 | A0A1R3INB0 | Uncharacterized protein. | Retrotransposon gag protein. | 0.479 |
COLO4_17143 | COLO4_22372 | A0A1R3JE12 | A0A1R3IM89 | Uncharacterized protein. | S1 domain-containing protein. | 0.999 |
COLO4_17143 | COLO4_23659 | A0A1R3JE12 | A0A1R3IFE6 | Uncharacterized protein. | Nudix hydrolase domain-containing protein. | 0.880 |
COLO4_17143 | COLO4_30028 | A0A1R3JE12 | A0A1R3HBJ6 | Uncharacterized protein. | Exosome complex RNA-binding protein 1/RRP40/RRP4. | 0.999 |
COLO4_22247 | COLO4_17143 | A0A1R3INB0 | A0A1R3JE12 | Retrotransposon gag protein. | Uncharacterized protein. | 0.479 |
COLO4_22247 | COLO4_22372 | A0A1R3INB0 | A0A1R3IM89 | Retrotransposon gag protein. | S1 domain-containing protein. | 0.524 |
COLO4_22247 | COLO4_23659 | A0A1R3INB0 | A0A1R3IFE6 | Retrotransposon gag protein. | Nudix hydrolase domain-containing protein. | 0.480 |
COLO4_22247 | COLO4_30028 | A0A1R3INB0 | A0A1R3HBJ6 | Retrotransposon gag protein. | Exosome complex RNA-binding protein 1/RRP40/RRP4. | 0.466 |
COLO4_22372 | COLO4_17143 | A0A1R3IM89 | A0A1R3JE12 | S1 domain-containing protein. | Uncharacterized protein. | 0.999 |
COLO4_22372 | COLO4_22247 | A0A1R3IM89 | A0A1R3INB0 | S1 domain-containing protein. | Retrotransposon gag protein. | 0.524 |
COLO4_22372 | COLO4_23659 | A0A1R3IM89 | A0A1R3IFE6 | S1 domain-containing protein. | Nudix hydrolase domain-containing protein. | 0.864 |
COLO4_22372 | COLO4_30028 | A0A1R3IM89 | A0A1R3HBJ6 | S1 domain-containing protein. | Exosome complex RNA-binding protein 1/RRP40/RRP4. | 0.999 |
COLO4_23659 | COLO4_17143 | A0A1R3IFE6 | A0A1R3JE12 | Nudix hydrolase domain-containing protein. | Uncharacterized protein. | 0.880 |
COLO4_23659 | COLO4_22247 | A0A1R3IFE6 | A0A1R3INB0 | Nudix hydrolase domain-containing protein. | Retrotransposon gag protein. | 0.480 |
COLO4_23659 | COLO4_22372 | A0A1R3IFE6 | A0A1R3IM89 | Nudix hydrolase domain-containing protein. | S1 domain-containing protein. | 0.864 |
COLO4_23659 | COLO4_30028 | A0A1R3IFE6 | A0A1R3HBJ6 | Nudix hydrolase domain-containing protein. | Exosome complex RNA-binding protein 1/RRP40/RRP4. | 0.787 |
COLO4_30028 | COLO4_17143 | A0A1R3HBJ6 | A0A1R3JE12 | Exosome complex RNA-binding protein 1/RRP40/RRP4. | Uncharacterized protein. | 0.999 |
COLO4_30028 | COLO4_22247 | A0A1R3HBJ6 | A0A1R3INB0 | Exosome complex RNA-binding protein 1/RRP40/RRP4. | Retrotransposon gag protein. | 0.466 |
COLO4_30028 | COLO4_22372 | A0A1R3HBJ6 | A0A1R3IM89 | Exosome complex RNA-binding protein 1/RRP40/RRP4. | S1 domain-containing protein. | 0.999 |
COLO4_30028 | COLO4_23659 | A0A1R3HBJ6 | A0A1R3IFE6 | Exosome complex RNA-binding protein 1/RRP40/RRP4. | Nudix hydrolase domain-containing protein. | 0.787 |