Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_02754 | COLO4_04866 | A0A1R3L0B5 | A0A1R3KSN8 | RNA polymerase, Rpb8. | DNA-directed RNA polymerase, RBP11-like protein. | 0.985 |
COLO4_02754 | COLO4_09055 | A0A1R3L0B5 | A0A1R3KDE0 | RNA polymerase, Rpb8. | Biotin/lipoyl attachment. | 0.914 |
COLO4_02754 | COLO4_11002 | A0A1R3L0B5 | A0A1R3K635 | RNA polymerase, Rpb8. | RNA polymerase II, Rpb4. | 0.995 |
COLO4_02754 | COLO4_11374 | A0A1R3L0B5 | A0A1R3K4S8 | RNA polymerase, Rpb8. | DNA-directed RNA polymerase, RBP11-like protein. | 0.985 |
COLO4_02754 | COLO4_14270 | A0A1R3L0B5 | A0A1R3JT94 | RNA polymerase, Rpb8. | RNA polymerase, subunit omega/K/RPABC2. | 0.997 |
COLO4_02754 | COLO4_21422 | A0A1R3L0B5 | A0A1R3ITB5 | RNA polymerase, Rpb8. | PMD domain-containing protein. | 0.619 |
COLO4_02754 | COLO4_24205 | A0A1R3L0B5 | A0A1R3IC48 | RNA polymerase, Rpb8. | Uncharacterized protein. | 0.995 |
COLO4_02754 | COLO4_32614 | A0A1R3L0B5 | A0A1R3GZ12 | RNA polymerase, Rpb8. | DNA-directed RNA polymerase, RBP11-like protein. | 0.995 |
COLO4_02754 | COLO4_33156 | A0A1R3L0B5 | A0A1R3GVW2 | RNA polymerase, Rpb8. | Transcription initiation Spt4-like protein. | 0.978 |
COLO4_04866 | COLO4_02754 | A0A1R3KSN8 | A0A1R3L0B5 | DNA-directed RNA polymerase, RBP11-like protein. | RNA polymerase, Rpb8. | 0.985 |
COLO4_04866 | COLO4_08613 | A0A1R3KSN8 | A0A1R3KF90 | DNA-directed RNA polymerase, RBP11-like protein. | RNA polymerase, Rpb8. | 0.985 |
COLO4_04866 | COLO4_09055 | A0A1R3KSN8 | A0A1R3KDE0 | DNA-directed RNA polymerase, RBP11-like protein. | Biotin/lipoyl attachment. | 0.910 |
COLO4_04866 | COLO4_11002 | A0A1R3KSN8 | A0A1R3K635 | DNA-directed RNA polymerase, RBP11-like protein. | RNA polymerase II, Rpb4. | 0.994 |
COLO4_04866 | COLO4_14270 | A0A1R3KSN8 | A0A1R3JT94 | DNA-directed RNA polymerase, RBP11-like protein. | RNA polymerase, subunit omega/K/RPABC2. | 0.997 |
COLO4_04866 | COLO4_21422 | A0A1R3KSN8 | A0A1R3ITB5 | DNA-directed RNA polymerase, RBP11-like protein. | PMD domain-containing protein. | 0.566 |
COLO4_04866 | COLO4_24205 | A0A1R3KSN8 | A0A1R3IC48 | DNA-directed RNA polymerase, RBP11-like protein. | Uncharacterized protein. | 0.997 |
COLO4_04866 | COLO4_32614 | A0A1R3KSN8 | A0A1R3GZ12 | DNA-directed RNA polymerase, RBP11-like protein. | DNA-directed RNA polymerase, RBP11-like protein. | 0.994 |
COLO4_04866 | COLO4_33156 | A0A1R3KSN8 | A0A1R3GVW2 | DNA-directed RNA polymerase, RBP11-like protein. | Transcription initiation Spt4-like protein. | 0.985 |
COLO4_08613 | COLO4_04866 | A0A1R3KF90 | A0A1R3KSN8 | RNA polymerase, Rpb8. | DNA-directed RNA polymerase, RBP11-like protein. | 0.985 |
COLO4_08613 | COLO4_09055 | A0A1R3KF90 | A0A1R3KDE0 | RNA polymerase, Rpb8. | Biotin/lipoyl attachment. | 0.914 |
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