Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_08049 | COLO4_08050 | A0A1R3KHP9 | A0A1R3KHP5 | Metallophos domain-containing protein. | Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase. | 0.858 |
COLO4_08049 | COLO4_13999 | A0A1R3KHP9 | A0A1R3JTT5 | Metallophos domain-containing protein. | Leucine-rich repeat, ribonuclease inhibitor subtype. | 0.810 |
COLO4_08049 | COLO4_21112 | A0A1R3KHP9 | A0A1R3IVC3 | Metallophos domain-containing protein. | ANK_REP_REGION domain-containing protein. | 0.626 |
COLO4_08049 | COLO4_22162 | A0A1R3KHP9 | A0A1R3INQ8 | Metallophos domain-containing protein. | Uncharacterized protein. | 0.685 |
COLO4_08049 | COLO4_22501 | A0A1R3KHP9 | A0A1R3ILM0 | Metallophos domain-containing protein. | ANK_REP_REGION domain-containing protein. | 0.626 |
COLO4_08049 | COLO4_25405 | A0A1R3KHP9 | A0A1R3I360 | Metallophos domain-containing protein. | Serine/threonine-protein phosphatase. | 0.709 |
COLO4_08049 | COLO4_25975 | A0A1R3KHP9 | A0A1R3HZ38 | Metallophos domain-containing protein. | Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. | 0.625 |
COLO4_08050 | COLO4_08049 | A0A1R3KHP5 | A0A1R3KHP9 | Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase. | Metallophos domain-containing protein. | 0.858 |
COLO4_08050 | COLO4_13999 | A0A1R3KHP5 | A0A1R3JTT5 | Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase. | Leucine-rich repeat, ribonuclease inhibitor subtype. | 0.810 |
COLO4_08050 | COLO4_21112 | A0A1R3KHP5 | A0A1R3IVC3 | Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase. | ANK_REP_REGION domain-containing protein. | 0.626 |
COLO4_08050 | COLO4_22162 | A0A1R3KHP5 | A0A1R3INQ8 | Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase. | Uncharacterized protein. | 0.685 |
COLO4_08050 | COLO4_22501 | A0A1R3KHP5 | A0A1R3ILM0 | Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase. | ANK_REP_REGION domain-containing protein. | 0.626 |
COLO4_08050 | COLO4_25405 | A0A1R3KHP5 | A0A1R3I360 | Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase. | Serine/threonine-protein phosphatase. | 0.733 |
COLO4_08050 | COLO4_25975 | A0A1R3KHP5 | A0A1R3HZ38 | Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase. | Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. | 0.625 |
COLO4_08574 | COLO4_13999 | A0A1R3KF79 | A0A1R3JTT5 | Amidase. | Leucine-rich repeat, ribonuclease inhibitor subtype. | 0.437 |
COLO4_08574 | COLO4_21112 | A0A1R3KF79 | A0A1R3IVC3 | Amidase. | ANK_REP_REGION domain-containing protein. | 0.505 |
COLO4_08574 | COLO4_22162 | A0A1R3KF79 | A0A1R3INQ8 | Amidase. | Uncharacterized protein. | 0.493 |
COLO4_08574 | COLO4_22501 | A0A1R3KF79 | A0A1R3ILM0 | Amidase. | ANK_REP_REGION domain-containing protein. | 0.505 |
COLO4_08574 | COLO4_22572 | A0A1R3KF79 | A0A1R3ILC9 | Amidase. | Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.519 |
COLO4_08574 | COLO4_25975 | A0A1R3KF79 | A0A1R3HZ38 | Amidase. | Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. | 0.753 |
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