Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_05541 | COLO4_10760 | A0A1R3KQK9 | A0A1R3K714 | Thioredoxin domain-containing protein. | Trehalase. | 0.459 |
COLO4_05541 | COLO4_21012 | A0A1R3KQK9 | A0A1R3IVN0 | Thioredoxin domain-containing protein. | Ephrin_rec_like domain-containing protein. | 0.751 |
COLO4_05541 | COLO4_31583 | A0A1R3KQK9 | A0A1R3H430 | Thioredoxin domain-containing protein. | Haloacid dehalogenase/epoxide hydrolase. | 0.419 |
COLO4_05541 | COLO4_31893 | A0A1R3KQK9 | A0A1R3H2W1 | Thioredoxin domain-containing protein. | E3 ubiquitin-protein ligase. | 0.655 |
COLO4_05541 | COLO4_33573 | A0A1R3KQK9 | A0A1R3GSJ9 | Thioredoxin domain-containing protein. | Haloacid dehalogenase/epoxide hydrolase. | 0.890 |
COLO4_05541 | COLO4_34797 | A0A1R3KQK9 | A0A1R3GJH1 | Thioredoxin domain-containing protein. | Uncharacterized protein. | 0.516 |
COLO4_10760 | COLO4_05541 | A0A1R3K714 | A0A1R3KQK9 | Trehalase. | Thioredoxin domain-containing protein. | 0.459 |
COLO4_10760 | COLO4_21012 | A0A1R3K714 | A0A1R3IVN0 | Trehalase. | Ephrin_rec_like domain-containing protein. | 0.680 |
COLO4_10760 | COLO4_31583 | A0A1R3K714 | A0A1R3H430 | Trehalase. | Haloacid dehalogenase/epoxide hydrolase. | 0.405 |
COLO4_10760 | COLO4_33573 | A0A1R3K714 | A0A1R3GSJ9 | Trehalase. | Haloacid dehalogenase/epoxide hydrolase. | 0.405 |
COLO4_10760 | COLO4_34797 | A0A1R3K714 | A0A1R3GJH1 | Trehalase. | Uncharacterized protein. | 0.912 |
COLO4_16706 | COLO4_21012 | A0A1R3JFZ9 | A0A1R3IVN0 | Uncharacterized protein. | Ephrin_rec_like domain-containing protein. | 0.705 |
COLO4_16706 | COLO4_26935 | A0A1R3JFZ9 | A0A1R3HTN9 | Uncharacterized protein. | Rhodanese domain-containing protein. | 0.528 |
COLO4_16706 | COLO4_34797 | A0A1R3JFZ9 | A0A1R3GJH1 | Uncharacterized protein. | Uncharacterized protein. | 0.739 |
COLO4_21012 | COLO4_05541 | A0A1R3IVN0 | A0A1R3KQK9 | Ephrin_rec_like domain-containing protein. | Thioredoxin domain-containing protein. | 0.751 |
COLO4_21012 | COLO4_10760 | A0A1R3IVN0 | A0A1R3K714 | Ephrin_rec_like domain-containing protein. | Trehalase. | 0.680 |
COLO4_21012 | COLO4_16706 | A0A1R3IVN0 | A0A1R3JFZ9 | Ephrin_rec_like domain-containing protein. | Uncharacterized protein. | 0.705 |
COLO4_21012 | COLO4_26935 | A0A1R3IVN0 | A0A1R3HTN9 | Ephrin_rec_like domain-containing protein. | Rhodanese domain-containing protein. | 0.895 |
COLO4_21012 | COLO4_29285 | A0A1R3IVN0 | A0A1R3HFD2 | Ephrin_rec_like domain-containing protein. | Prohibitin. | 0.702 |
COLO4_21012 | COLO4_31583 | A0A1R3IVN0 | A0A1R3H430 | Ephrin_rec_like domain-containing protein. | Haloacid dehalogenase/epoxide hydrolase. | 0.789 |
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