Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_02568 | COLO4_20876 | A0A1R3L0Q2 | A0A1R3IWE6 | 4Fe-4S ferredoxin-type domain-containing protein. | Uncharacterized protein. | 0.695 |
COLO4_02568 | COLO4_26904 | A0A1R3L0Q2 | A0A1R3HTI5 | 4Fe-4S ferredoxin-type domain-containing protein. | Amidohydrolase 2; Belongs to the glutamine synthetase family. | 0.921 |
COLO4_02568 | COLO4_32702 | A0A1R3L0Q2 | A0A1R3GYQ3 | 4Fe-4S ferredoxin-type domain-containing protein. | Glutamine synthetase. | 0.925 |
COLO4_02568 | COLO4_33549 | A0A1R3L0Q2 | A0A1R3GSN7 | 4Fe-4S ferredoxin-type domain-containing protein. | Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. | 0.789 |
COLO4_02568 | COLO4_36598 | A0A1R3L0Q2 | A0A1R3G7J0 | 4Fe-4S ferredoxin-type domain-containing protein. | Glutamine amidotransferase type-2 domain-containing protein. | 0.993 |
COLO4_02568 | COLO4_38556 | A0A1R3L0Q2 | A0A1R3FUA2 | 4Fe-4S ferredoxin-type domain-containing protein. | Glutamine synthetase, beta-Grasp. | 0.884 |
COLO4_03428 | COLO4_20876 | A0A1R3KYI8 | A0A1R3IWE6 | Uncharacterized protein. | Uncharacterized protein. | 0.695 |
COLO4_03428 | COLO4_26904 | A0A1R3KYI8 | A0A1R3HTI5 | Uncharacterized protein. | Amidohydrolase 2; Belongs to the glutamine synthetase family. | 0.921 |
COLO4_03428 | COLO4_32702 | A0A1R3KYI8 | A0A1R3GYQ3 | Uncharacterized protein. | Glutamine synthetase. | 0.925 |
COLO4_03428 | COLO4_33549 | A0A1R3KYI8 | A0A1R3GSN7 | Uncharacterized protein. | Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. | 0.789 |
COLO4_03428 | COLO4_36598 | A0A1R3KYI8 | A0A1R3G7J0 | Uncharacterized protein. | Glutamine amidotransferase type-2 domain-containing protein. | 0.993 |
COLO4_03428 | COLO4_38556 | A0A1R3KYI8 | A0A1R3FUA2 | Uncharacterized protein. | Glutamine synthetase, beta-Grasp. | 0.884 |
COLO4_20876 | COLO4_02568 | A0A1R3IWE6 | A0A1R3L0Q2 | Uncharacterized protein. | 4Fe-4S ferredoxin-type domain-containing protein. | 0.695 |
COLO4_20876 | COLO4_03428 | A0A1R3IWE6 | A0A1R3KYI8 | Uncharacterized protein. | Uncharacterized protein. | 0.695 |
COLO4_20876 | COLO4_21626 | A0A1R3IWE6 | A0A1R3IS71 | Uncharacterized protein. | Guanylate kinase. | 0.635 |
COLO4_20876 | COLO4_26904 | A0A1R3IWE6 | A0A1R3HTI5 | Uncharacterized protein. | Amidohydrolase 2; Belongs to the glutamine synthetase family. | 0.624 |
COLO4_20876 | COLO4_28205 | A0A1R3IWE6 | A0A1R3HMF9 | Uncharacterized protein. | Guanylate kinase. | 0.635 |
COLO4_20876 | COLO4_32702 | A0A1R3IWE6 | A0A1R3GYQ3 | Uncharacterized protein. | Glutamine synthetase. | 0.575 |
COLO4_20876 | COLO4_33549 | A0A1R3IWE6 | A0A1R3GSN7 | Uncharacterized protein. | Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. | 0.575 |
COLO4_20876 | COLO4_36597 | A0A1R3IWE6 | A0A1R3G7I2 | Uncharacterized protein. | Uncharacterized protein. | 0.695 |
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