Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_11799 | COLO4_11800 | A0A1R3K372 | A0A1R3K370 | AMP-dependent synthetase/ligase. | AMP-dependent synthetase/ligase. | 0.570 |
COLO4_11799 | COLO4_13390 | A0A1R3K372 | A0A1R3JWV9 | AMP-dependent synthetase/ligase. | Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. | 0.871 |
COLO4_11799 | COLO4_20386 | A0A1R3K372 | A0A1R3J022 | AMP-dependent synthetase/ligase. | O-methyltransferase, family 3. | 0.773 |
COLO4_11799 | COLO4_26682 | A0A1R3K372 | A0A1R3HV24 | AMP-dependent synthetase/ligase. | NAD-dependent epimerase/dehydratase. | 0.928 |
COLO4_11799 | COLO4_26752 | A0A1R3K372 | A0A1R3HUQ8 | AMP-dependent synthetase/ligase. | Transferase. | 0.874 |
COLO4_11799 | COLO4_28288 | A0A1R3K372 | A0A1R3HM68 | AMP-dependent synthetase/ligase. | AMP-dependent synthetase/ligase. | 0.581 |
COLO4_11799 | COLO4_30889 | A0A1R3K372 | A0A1R3H6L5 | AMP-dependent synthetase/ligase. | AMP-dependent synthetase/ligase. | 0.581 |
COLO4_11800 | COLO4_11799 | A0A1R3K370 | A0A1R3K372 | AMP-dependent synthetase/ligase. | AMP-dependent synthetase/ligase. | 0.570 |
COLO4_11800 | COLO4_13390 | A0A1R3K370 | A0A1R3JWV9 | AMP-dependent synthetase/ligase. | Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. | 0.871 |
COLO4_11800 | COLO4_20386 | A0A1R3K370 | A0A1R3J022 | AMP-dependent synthetase/ligase. | O-methyltransferase, family 3. | 0.773 |
COLO4_11800 | COLO4_26682 | A0A1R3K370 | A0A1R3HV24 | AMP-dependent synthetase/ligase. | NAD-dependent epimerase/dehydratase. | 0.928 |
COLO4_11800 | COLO4_26752 | A0A1R3K370 | A0A1R3HUQ8 | AMP-dependent synthetase/ligase. | Transferase. | 0.874 |
COLO4_11800 | COLO4_28288 | A0A1R3K370 | A0A1R3HM68 | AMP-dependent synthetase/ligase. | AMP-dependent synthetase/ligase. | 0.577 |
COLO4_11800 | COLO4_30889 | A0A1R3K370 | A0A1R3H6L5 | AMP-dependent synthetase/ligase. | AMP-dependent synthetase/ligase. | 0.578 |
COLO4_13390 | COLO4_11799 | A0A1R3JWV9 | A0A1R3K372 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. | AMP-dependent synthetase/ligase. | 0.871 |
COLO4_13390 | COLO4_11800 | A0A1R3JWV9 | A0A1R3K370 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. | AMP-dependent synthetase/ligase. | 0.871 |
COLO4_13390 | COLO4_16895 | A0A1R3JWV9 | A0A1R3JF70 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. | AMP-dependent synthetase/ligase. | 0.924 |
COLO4_13390 | COLO4_20386 | A0A1R3JWV9 | A0A1R3J022 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. | O-methyltransferase, family 3. | 0.843 |
COLO4_13390 | COLO4_20414 | A0A1R3JWV9 | A0A1R3IZX8 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. | AMP-dependent synthetase/ligase. | 0.928 |
COLO4_13390 | COLO4_26682 | A0A1R3JWV9 | A0A1R3HV24 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. | NAD-dependent epimerase/dehydratase. | 0.920 |
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