Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_00013 | COLO4_20175 | A0A1R3L4Y0 | A0A1R3J1A7 | TIR domain-containing protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.422 |
COLO4_10331 | COLO4_18859 | A0A1R3K8Z3 | A0A1R3J7N3 | CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. | Uncharacterized protein. | 0.408 |
COLO4_10331 | COLO4_20175 | A0A1R3K8Z3 | A0A1R3J1A7 | CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.481 |
COLO4_12957 | COLO4_15077 | A0A1R3JZ07 | A0A1R3JPP2 | Uncharacterized protein. | F-box domain-containing protein. | 0.413 |
COLO4_12957 | COLO4_20175 | A0A1R3JZ07 | A0A1R3J1A7 | Uncharacterized protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.442 |
COLO4_13672 | COLO4_15077 | A0A1R3JVK5 | A0A1R3JPP2 | Terpene_synth_C domain-containing protein. | F-box domain-containing protein. | 0.453 |
COLO4_13672 | COLO4_20175 | A0A1R3JVK5 | A0A1R3J1A7 | Terpene_synth_C domain-containing protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.496 |
COLO4_13672 | COLO4_38160 | A0A1R3JVK5 | A0A1R3FWM6 | Terpene_synth_C domain-containing protein. | Uncharacterized protein. | 0.479 |
COLO4_14081 | COLO4_15077 | A0A1R3JTH4 | A0A1R3JPP2 | Terpene_synth_C domain-containing protein. | F-box domain-containing protein. | 0.453 |
COLO4_14081 | COLO4_20175 | A0A1R3JTH4 | A0A1R3J1A7 | Terpene_synth_C domain-containing protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.473 |
COLO4_14081 | COLO4_38160 | A0A1R3JTH4 | A0A1R3FWM6 | Terpene_synth_C domain-containing protein. | Uncharacterized protein. | 0.468 |
COLO4_15077 | COLO4_12957 | A0A1R3JPP2 | A0A1R3JZ07 | F-box domain-containing protein. | Uncharacterized protein. | 0.413 |
COLO4_15077 | COLO4_13672 | A0A1R3JPP2 | A0A1R3JVK5 | F-box domain-containing protein. | Terpene_synth_C domain-containing protein. | 0.453 |
COLO4_15077 | COLO4_14081 | A0A1R3JPP2 | A0A1R3JTH4 | F-box domain-containing protein. | Terpene_synth_C domain-containing protein. | 0.453 |
COLO4_15077 | COLO4_18859 | A0A1R3JPP2 | A0A1R3J7N3 | F-box domain-containing protein. | Uncharacterized protein. | 0.427 |
COLO4_15077 | COLO4_20175 | A0A1R3JPP2 | A0A1R3J1A7 | F-box domain-containing protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.445 |
COLO4_15077 | COLO4_31674 | A0A1R3JPP2 | A0A1R3H3R1 | F-box domain-containing protein. | Terpene_synth_C domain-containing protein. | 0.428 |
COLO4_18859 | COLO4_10331 | A0A1R3J7N3 | A0A1R3K8Z3 | Uncharacterized protein. | CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. | 0.408 |
COLO4_18859 | COLO4_15077 | A0A1R3J7N3 | A0A1R3JPP2 | Uncharacterized protein. | F-box domain-containing protein. | 0.427 |
COLO4_18859 | COLO4_20175 | A0A1R3J7N3 | A0A1R3J1A7 | Uncharacterized protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.501 |
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