Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_03544 | COLO4_04289 | A0A1R3KY43 | A0A1R3KUK5 | Phosphoadenosine phosphosulfate reductase. | Phosphoadenosine phosphosulfate reductase. | 0.999 |
COLO4_03544 | COLO4_06083 | A0A1R3KY43 | A0A1R3KP28 | Phosphoadenosine phosphosulfate reductase. | Tryptophan synthase, alpha chain; Belongs to the TrpA family. | 0.785 |
COLO4_03544 | COLO4_19416 | A0A1R3KY43 | A0A1R3J5E4 | Phosphoadenosine phosphosulfate reductase. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.888 |
COLO4_03544 | COLO4_31790 | A0A1R3KY43 | A0A1R3H3B2 | Phosphoadenosine phosphosulfate reductase. | Thioredoxin-independent 5'-adenylylsulfate reductase. | 0.999 |
COLO4_03544 | COLO4_32799 | A0A1R3KY43 | A0A1R3GY29 | Phosphoadenosine phosphosulfate reductase. | Uncharacterized protein. | 0.999 |
COLO4_04289 | COLO4_03544 | A0A1R3KUK5 | A0A1R3KY43 | Phosphoadenosine phosphosulfate reductase. | Phosphoadenosine phosphosulfate reductase. | 0.999 |
COLO4_04289 | COLO4_06083 | A0A1R3KUK5 | A0A1R3KP28 | Phosphoadenosine phosphosulfate reductase. | Tryptophan synthase, alpha chain; Belongs to the TrpA family. | 0.785 |
COLO4_04289 | COLO4_19416 | A0A1R3KUK5 | A0A1R3J5E4 | Phosphoadenosine phosphosulfate reductase. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.888 |
COLO4_04289 | COLO4_31790 | A0A1R3KUK5 | A0A1R3H3B2 | Phosphoadenosine phosphosulfate reductase. | Thioredoxin-independent 5'-adenylylsulfate reductase. | 0.999 |
COLO4_04289 | COLO4_32799 | A0A1R3KUK5 | A0A1R3GY29 | Phosphoadenosine phosphosulfate reductase. | Uncharacterized protein. | 0.999 |
COLO4_06083 | COLO4_03544 | A0A1R3KP28 | A0A1R3KY43 | Tryptophan synthase, alpha chain; Belongs to the TrpA family. | Phosphoadenosine phosphosulfate reductase. | 0.785 |
COLO4_06083 | COLO4_04289 | A0A1R3KP28 | A0A1R3KUK5 | Tryptophan synthase, alpha chain; Belongs to the TrpA family. | Phosphoadenosine phosphosulfate reductase. | 0.785 |
COLO4_06083 | COLO4_19416 | A0A1R3KP28 | A0A1R3J5E4 | Tryptophan synthase, alpha chain; Belongs to the TrpA family. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.522 |
COLO4_06083 | COLO4_20946 | A0A1R3KP28 | A0A1R3IW17 | Tryptophan synthase, alpha chain; Belongs to the TrpA family. | Pyridoxal phosphate-dependent decarboxylase. | 0.891 |
COLO4_06083 | COLO4_30318 | A0A1R3KP28 | A0A1R3H947 | Tryptophan synthase, alpha chain; Belongs to the TrpA family. | Aminotransferase, class I/classII. | 0.909 |
COLO4_06083 | COLO4_31790 | A0A1R3KP28 | A0A1R3H3B2 | Tryptophan synthase, alpha chain; Belongs to the TrpA family. | Thioredoxin-independent 5'-adenylylsulfate reductase. | 0.785 |
COLO4_13435 | COLO4_19416 | A0A1R3JWH5 | A0A1R3J5E4 | FHA domain-containing protein. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.490 |
COLO4_13435 | COLO4_31935 | A0A1R3JWH5 | A0A1R3H326 | FHA domain-containing protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.532 |
COLO4_13435 | COLO4_36035 | A0A1R3JWH5 | A0A1R3GBB3 | FHA domain-containing protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.532 |
COLO4_19416 | COLO4_03544 | A0A1R3J5E4 | A0A1R3KY43 | Cytochrome P450; Belongs to the cytochrome P450 family. | Phosphoadenosine phosphosulfate reductase. | 0.888 |
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