STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_19265Nucleic acid-binding protein. (452 aa)    
Predicted Functional Partners:
COLO4_03543
3'-5' exonuclease domain-containing protein.
    
 0.909
COLO4_19317
Uncharacterized protein.
    
 0.766
COLO4_37720
Nucleic acid binding, tRNA/helicase-type.
   
 0.748
COLO4_19047
Nucleic acid binding, tRNA/helicase-type.
   
 0.748
COLO4_12801
Uncharacterized protein.
    
 0.712
COLO4_19083
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.704
COLO4_30250
Timeless protein.
    
 
 0.627
COLO4_04642
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 
 0.595
COLO4_06683
ERCC4 domain-containing protein.
    
 0.587
COLO4_06684
PPIase cyclophilin-type domain-containing protein.
    
 0.587
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
Server load: low (16%) [HD]