Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_03543 | COLO4_04642 | A0A1R3KY08 | A0A1R3KT84 | 3'-5' exonuclease domain-containing protein. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.632 |
COLO4_03543 | COLO4_06683 | A0A1R3KY08 | A0A1R3KM84 | 3'-5' exonuclease domain-containing protein. | ERCC4 domain-containing protein. | 0.944 |
COLO4_03543 | COLO4_06684 | A0A1R3KY08 | A0A1R3KM93 | 3'-5' exonuclease domain-containing protein. | PPIase cyclophilin-type domain-containing protein. | 0.944 |
COLO4_03543 | COLO4_12801 | A0A1R3KY08 | A0A1R3JZU2 | 3'-5' exonuclease domain-containing protein. | Uncharacterized protein. | 0.949 |
COLO4_03543 | COLO4_19047 | A0A1R3KY08 | A0A1R3J6W6 | 3'-5' exonuclease domain-containing protein. | Nucleic acid binding, tRNA/helicase-type. | 0.977 |
COLO4_03543 | COLO4_19083 | A0A1R3KY08 | A0A1R3J6S1 | 3'-5' exonuclease domain-containing protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.979 |
COLO4_03543 | COLO4_19265 | A0A1R3KY08 | A0A1R3J682 | 3'-5' exonuclease domain-containing protein. | Nucleic acid-binding protein. | 0.909 |
COLO4_03543 | COLO4_19317 | A0A1R3KY08 | A0A1R3J5M4 | 3'-5' exonuclease domain-containing protein. | Uncharacterized protein. | 0.998 |
COLO4_03543 | COLO4_30250 | A0A1R3KY08 | A0A1R3H9P6 | 3'-5' exonuclease domain-containing protein. | Timeless protein. | 0.903 |
COLO4_03543 | COLO4_37720 | A0A1R3KY08 | A0A1R3FZT6 | 3'-5' exonuclease domain-containing protein. | Nucleic acid binding, tRNA/helicase-type. | 0.977 |
COLO4_04642 | COLO4_03543 | A0A1R3KT84 | A0A1R3KY08 | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 3'-5' exonuclease domain-containing protein. | 0.632 |
COLO4_04642 | COLO4_06683 | A0A1R3KT84 | A0A1R3KM84 | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | ERCC4 domain-containing protein. | 0.400 |
COLO4_04642 | COLO4_06684 | A0A1R3KT84 | A0A1R3KM93 | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | PPIase cyclophilin-type domain-containing protein. | 0.400 |
COLO4_04642 | COLO4_19265 | A0A1R3KT84 | A0A1R3J682 | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | Nucleic acid-binding protein. | 0.595 |
COLO4_04642 | COLO4_19317 | A0A1R3KT84 | A0A1R3J5M4 | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | Uncharacterized protein. | 0.450 |
COLO4_06683 | COLO4_03543 | A0A1R3KM84 | A0A1R3KY08 | ERCC4 domain-containing protein. | 3'-5' exonuclease domain-containing protein. | 0.944 |
COLO4_06683 | COLO4_04642 | A0A1R3KM84 | A0A1R3KT84 | ERCC4 domain-containing protein. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.400 |
COLO4_06683 | COLO4_12801 | A0A1R3KM84 | A0A1R3JZU2 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.971 |
COLO4_06683 | COLO4_19047 | A0A1R3KM84 | A0A1R3J6W6 | ERCC4 domain-containing protein. | Nucleic acid binding, tRNA/helicase-type. | 0.931 |
COLO4_06683 | COLO4_19083 | A0A1R3KM84 | A0A1R3J6S1 | ERCC4 domain-containing protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.946 |
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