Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_14061 | COLO4_17691 | A0A1R3JTU5 | A0A1R3JBY5 | DAGKc domain-containing protein. | Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. | 0.921 |
COLO4_14061 | COLO4_19081 | A0A1R3JTU5 | A0A1R3J6Z7 | DAGKc domain-containing protein. | Neutral ceramidase. | 0.927 |
COLO4_14061 | COLO4_20189 | A0A1R3JTU5 | A0A1R3J1C4 | DAGKc domain-containing protein. | Ceramidase. | 0.940 |
COLO4_14061 | COLO4_20272 | A0A1R3JTU5 | A0A1R3J0R4 | DAGKc domain-containing protein. | Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. | 0.921 |
COLO4_14061 | COLO4_20849 | A0A1R3JTU5 | A0A1R3IWK1 | DAGKc domain-containing protein. | Short-chain dehydrogenase/reductase SDR. | 0.617 |
COLO4_14061 | COLO4_23001 | A0A1R3JTU5 | A0A1R3IIM7 | DAGKc domain-containing protein. | Fatty acid hydroxylase; Belongs to the sterol desaturase family. | 0.584 |
COLO4_14061 | COLO4_24884 | A0A1R3JTU5 | A0A1R3I626 | DAGKc domain-containing protein. | Glucosylceramidase. | 0.921 |
COLO4_14061 | COLO4_31496 | A0A1R3JTU5 | A0A1R3H464 | DAGKc domain-containing protein. | Zinc finger, RING-type. | 0.932 |
COLO4_14061 | COLO4_31573 | A0A1R3JTU5 | A0A1R3H4D6 | DAGKc domain-containing protein. | DAGKc domain-containing protein. | 0.422 |
COLO4_14061 | COLO4_31872 | A0A1R3JTU5 | A0A1R3H359 | DAGKc domain-containing protein. | Ceramidase. | 0.940 |
COLO4_17691 | COLO4_14061 | A0A1R3JBY5 | A0A1R3JTU5 | Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. | DAGKc domain-containing protein. | 0.921 |
COLO4_17691 | COLO4_19081 | A0A1R3JBY5 | A0A1R3J6Z7 | Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. | Neutral ceramidase. | 0.908 |
COLO4_17691 | COLO4_20189 | A0A1R3JBY5 | A0A1R3J1C4 | Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. | Ceramidase. | 0.634 |
COLO4_17691 | COLO4_20272 | A0A1R3JBY5 | A0A1R3J0R4 | Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. | Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. | 0.883 |
COLO4_17691 | COLO4_24884 | A0A1R3JBY5 | A0A1R3I626 | Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. | Glucosylceramidase. | 0.852 |
COLO4_17691 | COLO4_31496 | A0A1R3JBY5 | A0A1R3H464 | Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. | Zinc finger, RING-type. | 0.888 |
COLO4_17691 | COLO4_31573 | A0A1R3JBY5 | A0A1R3H4D6 | Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. | DAGKc domain-containing protein. | 0.506 |
COLO4_17691 | COLO4_31872 | A0A1R3JBY5 | A0A1R3H359 | Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. | Ceramidase. | 0.634 |
COLO4_19081 | COLO4_14061 | A0A1R3J6Z7 | A0A1R3JTU5 | Neutral ceramidase. | DAGKc domain-containing protein. | 0.927 |
COLO4_19081 | COLO4_17691 | A0A1R3J6Z7 | A0A1R3JBY5 | Neutral ceramidase. | Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. | 0.908 |
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