STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_18818Cytochrome P450; Belongs to the cytochrome P450 family. (530 aa)    
Predicted Functional Partners:
COLO4_32799
Uncharacterized protein.
    
 0.865
COLO4_33904
Cytochrome P450; Belongs to the cytochrome P450 family.
  
  
  0.729
COLO4_15035
S5A_REDUCTASE domain-containing protein.
    
 0.633
COLO4_31741
Cytochrome P450; Belongs to the cytochrome P450 family.
  
 
 
0.631
COLO4_08589
Cytochrome P450.
  
  
 
0.602
COLO4_19114
Cytochrome P450.
  
  
 
0.601
COLO4_24721
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.568
COLO4_12105
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.568
COLO4_04289
Phosphoadenosine phosphosulfate reductase.
    
  0.567
COLO4_03544
Phosphoadenosine phosphosulfate reductase.
    
  0.567
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.