STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_18743Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (952 aa)    
Predicted Functional Partners:
COLO4_22046
Inorganic pyrophosphatase.
     
 0.890
COLO4_14859
Inorganic pyrophosphatase.
     
 0.883
COLO4_23063
Inorganic pyrophosphatase.
     
 0.875
COLO4_17845
Inorganic pyrophosphatase.
     
 0.874
COLO4_17389
ATPase, F1 complex, OSCP/delta subunit.
   
  0.581
COLO4_15624
Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity; Belongs to the adenylate kinase family. AK6 subfamily.
     
 0.548
COLO4_16184
14-3-3 protein; Belongs to the 14-3-3 family.
    
 
 0.540
COLO4_35344
Inorganic pyrophosphatase.
     
 0.533
COLO4_31156
Uncharacterized protein; Belongs to the peptidase S8 family.
    
 0.521
COLO4_28076
Adenylate kinase; Belongs to the adenylate kinase family.
   
 
 0.507
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.