Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_17796 | COLO4_24418 | A0A1R3JBK7 | A0A1R3IA52 | Globin; Belongs to the globin family. | Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. | 0.653 |
COLO4_17796 | COLO4_26194 | A0A1R3JBK7 | A0A1R3HYD1 | Globin; Belongs to the globin family. | DUF4101 domain-containing protein. | 0.573 |
COLO4_17796 | COLO4_27584 | A0A1R3JBK7 | A0A1R3HQ32 | Globin; Belongs to the globin family. | Translation initiation factor eIF3 subunit. | 0.577 |
COLO4_17796 | COLO4_32799 | A0A1R3JBK7 | A0A1R3GY29 | Globin; Belongs to the globin family. | Uncharacterized protein. | 0.823 |
COLO4_17796 | COLO4_34689 | A0A1R3JBK7 | A0A1R3GJZ5 | Globin; Belongs to the globin family. | Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.577 |
COLO4_17796 | COLO4_37978 | A0A1R3JBK7 | A0A1R3FY03 | Globin; Belongs to the globin family. | DUF4371 domain-containing protein. | 0.562 |
COLO4_17796 | COLO4_38128 | A0A1R3JBK7 | A0A1R3FWU0 | Globin; Belongs to the globin family. | DUF4371 domain-containing protein. | 0.562 |
COLO4_17796 | COLO4_38284 | A0A1R3JBK7 | A0A1R3FVT3 | Globin; Belongs to the globin family. | Uncharacterized protein. | 0.562 |
COLO4_17796 | COLO4_38446 | A0A1R3JBK7 | A0A1R3FV76 | Globin; Belongs to the globin family. | Uncharacterized protein. | 0.562 |
COLO4_17796 | COLO4_38561 | A0A1R3JBK7 | A0A1R3FU92 | Globin; Belongs to the globin family. | Zinc finger, TTF-type. | 0.562 |
COLO4_24418 | COLO4_17796 | A0A1R3IA52 | A0A1R3JBK7 | Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. | Globin; Belongs to the globin family. | 0.653 |
COLO4_24418 | COLO4_32799 | A0A1R3IA52 | A0A1R3GY29 | Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. | Uncharacterized protein. | 0.955 |
COLO4_26194 | COLO4_17796 | A0A1R3HYD1 | A0A1R3JBK7 | DUF4101 domain-containing protein. | Globin; Belongs to the globin family. | 0.573 |
COLO4_27584 | COLO4_17796 | A0A1R3HQ32 | A0A1R3JBK7 | Translation initiation factor eIF3 subunit. | Globin; Belongs to the globin family. | 0.577 |
COLO4_32799 | COLO4_17796 | A0A1R3GY29 | A0A1R3JBK7 | Uncharacterized protein. | Globin; Belongs to the globin family. | 0.823 |
COLO4_32799 | COLO4_24418 | A0A1R3GY29 | A0A1R3IA52 | Uncharacterized protein. | Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. | 0.955 |
COLO4_34689 | COLO4_17796 | A0A1R3GJZ5 | A0A1R3JBK7 | Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | Globin; Belongs to the globin family. | 0.577 |
COLO4_37978 | COLO4_17796 | A0A1R3FY03 | A0A1R3JBK7 | DUF4371 domain-containing protein. | Globin; Belongs to the globin family. | 0.562 |
COLO4_38128 | COLO4_17796 | A0A1R3FWU0 | A0A1R3JBK7 | DUF4371 domain-containing protein. | Globin; Belongs to the globin family. | 0.562 |
COLO4_38128 | COLO4_38561 | A0A1R3FWU0 | A0A1R3FU92 | DUF4371 domain-containing protein. | Zinc finger, TTF-type. | 0.486 |
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