STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_17654Chaperonin Cpn60; Belongs to the chaperonin (HSP60) family. (584 aa)    
Predicted Functional Partners:
COLO4_21229
GroES-like protein; Belongs to the GroES chaperonin family.
 
 
 0.962
COLO4_13606
Chaperonin Cpn60/TCP-1.
   
0.936
COLO4_12353
GroES-like protein; Belongs to the GroES chaperonin family.
  
 
 0.923
COLO4_24932
GroES-like protein; Belongs to the GroES chaperonin family.
  
 
 0.907
COLO4_13157
GroES-like protein; Belongs to the GroES chaperonin family.
  
 
 0.907
COLO4_11679
Chaperone DnaK; Belongs to the heat shock protein 70 family.
  
 0.857
COLO4_09625
Heat shock protein 70 family.
  
 0.857
COLO4_01529
Heat shock protein 70 family.
  
 0.857
COLO4_38562
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 0.803
COLO4_29498
Sucrose-phosphate phosphatase.
  
 0.803
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.